Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1623 atgtttaaacAATCTCAACATAGGCATCTTTTTAGAGACACCCACATCTCAGCCTTCATAATAATCTTTGGCACAAACACCCATCTCCTCCATCCTTATTCTCCACAATTCAAGCCAGCACAAAATTCTAGTCATGTTGGGGAAGAGGCCTCAGCCACTGATCGGAAAATTTCCGAATTGTTGGTCTCCGGTGGCCGCGCCGCCGCACTTTTGGACTGCATCGGAAGCCCAAGAAGCCCGTTTGACGTGAACTTAAAGATGCAATCACCAAAGGGCCTAAAAAGCTACGACCTTGGTGGTGTTGGTCTAGGAATTGTGGTGGCCCTTGATAAGTCCGAGGAACCGGGGCATGAAGTTCTGCCCAAACATGCCGTTTGCACATCAAATTTGAACCGATCCGGACCAATCCCAGTTAAACACCAACGTGGGTTTCAAAAGGGTGCGAACGAAATTCCCGTTGGAAGCTCCGAGGATTACACCTATGTGACATACCATGTACCTAACAAGACCATCACTAAGGTTTATTACGATGGTGGTGAAGGTGGAATTAGAACAAATGGGtactataatattaataattgtaacaataacaacaacaacaacgttGGTGTTATTAGAAGAATCCCACCAACGCAAACTTTAGTTGAAGATGAACCATCATATCCCACCTCGTATTTTCTCAGTTCATGTCACTTGTGCCGAAAGAATCTCCATGGCAAAGACATATACATGTACAGAGGAGAGAAGGCATTTTGTAGCGCCGAGTGCCGTTCAAGGCAGATAATGATAGACGAACGCAAAGAGCGGTGTAGATTAGAAGCTTCAAGGTCTGTGGAGTTGTCAAGTTCACCATACACAAGGGACCAAATGTTTTCAACTGGGATTGTGGCCCTTTAA 897 0.4337 MFKQSQHRHLFRDTHISAFIIIFGTNTHLLHPYSPQFKPAQNSSHVGEEASATDRKISELLVSGGRAAALLDCIGSPRSPFDVNLKMQSPKGLKSYDLGGVGLGIVVALDKSEEPGHEVLPKHAVCTSNLNRSGPIPVKHQRGFQKGANEIPVGSSEDYTYVTYHVPNKTITKVYYDGGEGGIRTNGYYNINNCNNNNNNNVGVIRRIPPTQTLVEDEPSYPTSYFLSSCHLCRKNLHGKDIYMYRGEKAFCSAECRSRQIMIDERKERCRLEASRSVELSSSPYTRDQMFSTGIVAL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1623 298 ProSiteProfiles Zinc finger FLZ-type profile. 225 268 IPR007650 -
Ssu1g1623 298 PANTHER OS02G0174800 PROTEIN 47 298 IPR044604 -
Ssu1g1623 298 PANTHER DUF581 FAMILY PROTEIN 47 298 - -
Ssu1g1623 298 Pfam zinc-finger of the FCS-type, C2-C2 217 267 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1623 Ssu-Chr1 38574556 38576067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1623 - - gmx:100813156 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0568 6 8861178 8861997 Ssu1g1623 1 38574556 38576067 PCT