Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0557 ATGAACGACGTTTCTCCTCTTGAGGCCCAAGCCTTCAACTACTTGAGCTTCGGTTTCCTCACCCTCCTCAACAATTTCTGGACCTGGCTCGCCCTCCCTTTCTGGAGGATCCGAACCCCCAAGTCCGAATTGCTGCCACCTCCCGATGAATCAGAGCCTGTTGCCGTATCCGAGCCAGCGCCGCCGCGTTTACCAACTGCGCTTGGTAACGGCGCCGTTGACGTTGACGGAGCGAGGAAGGGGAAGTTTACCTTGTATTACGAGGGTGATGAGACGGAATGCGAGAGCGACGAAACGGTAACGGAGGAGAGAGACGGAAAACTGGAGTGGTGGGAGAGCTGGGAAAGGTTGTTGAGGATGAGACGAGGAGAGAACGAGAACGGGTGGTACACGTGCCAGGATTTAACGGCGTTTAACGGCAGCGTTGTCAGGTTATGGGATGGTGGCTTCACCAGGGAATCGAGGGACAGCTCAAGCTGTGTTCTTGTATGCTAA 495 0.5515 MNDVSPLEAQAFNYLSFGFLTLLNNFWTWLALPFWRIRTPKSELLPPPDESEPVAVSEPAPPRLPTALGNGAVDVDGARKGKFTLYYEGDETECESDETVTEERDGKLEWWESWERLLRMRRGENENGWYTCQDLTAFNGSVVRLWDGGFTRESRDSSSCVLVC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0557 164 PANTHER TRANSMEMBRANE PROTEIN 5 160 - -
Ssu6g0557 164 PANTHER PROTEIN, PUTATIVE-RELATED 5 160 - -
Ssu6g0557 164 MobiDBLite consensus disorder prediction 46 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0557 Ssu-Chr6 8667443 8667937 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0557 - - gmx:100806863 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0557 6 8667443 8667937 Ssu6g0557 6 8667443 8667937 ECH
Ssu6g0557 6 8667443 8667937 Ssu1g1635 1 39151588 39163383 PCT