Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1635 ATGGACACAAAAGCAACATTGTCGGGGTTGCAAGATGAGGCCAGTTCCACCAAATCAATAGGAAAGAGGGAGAATAACAACACCTGTTTGGAGGAGGGAGAGAAGAAATTGTACAAAGAAATGATGATGGGCAACAAACTAGAGAAAGAAAGGTCTAACTGGGACAGTGAGGAGGATGACTTTTATCCAAACAGTCATAAGGATGATAGTCTGagcaaagaaagagaaagtgagGACATAAAGAGAGAGCCTGAAGGAGAATTGGAGAATGAGCCCGAGGACATCACGGAGAGGCACACAATAGTTAACTACAGGCCTATAAACCCAGAAGTTTCTGCCAACACGTGTGCTAAGGTCGCGGAGGTGGTCATGATGGAAACCTCGAGTGAAGCCTTCAACTACTTGAGCTTCGGTTTGCTCACTGCCCTCAACAATTTATGGACCTGGGTCGCTCTCCTCACCGCCGCACTCAGCTTCTGGAAGATTCGATCCGCAGGTTGCCCCAAGCCCAAACCCGAGGCCCAACCCTCCATCGGGCCCGACCCGGTCACGGATACGTTGGCGCCTACTGACGTAACGGTGGAGAAAACGGAGCCAAGGCGACAACCCGCGGTTGGTAACGGCGTAACGGAGGACGTTGACGGCGTGAGGAAGGGGAAGTTTACGGTGTATTACGAGGAGGACACGAAATGCACGTGCGGCGAGCGTAAGGGGTTCTCGACGGCGTGGCAAGAAGAGAGAGAGCGGTCCGAAGAAACGGAGTGGTGGGAGAGGTTGTTGCGGTTGAGAAACGGGGAGAGCGAGAACGGGTGGTACACGTGGCAGGACTTGACGGAGCTTAACGGCAACGTTGTTAGATTATGGGATGGTGGGTTAAGTGGTTCTACTACTTTCGTGAGGGAATCATGGTACAACTCCAGCTGTATCCATGTGTGGTCTCCCAGTGACAGCAAGCTCTTTGACAAGGTTGAAACTCCGTGGAAAATGGGTGCGTACTTGCAAAAAGACTCCAATGCTCAAGTACAAGGCAGATTTTCATCCAACGGGATAGGTGATCGAGGGCTACTACCCATGCCCATCTTGCCCCATTTCCATCCATTGTTGGATTCCTTGGTATGGGACCCAAGGGCTCTCAAGAGCAATATTCTCCTACCTTATTGTAGCAACATGGTGACTTTACTCCAGGCCAGGATGTAA 1197 0.5029 MDTKATLSGLQDEASSTKSIGKRENNNTCLEEGEKKLYKEMMMGNKLEKERSNWDSEEDDFYPNSHKDDSLSKERESEDIKREPEGELENEPEDITERHTIVNYRPINPEVSANTCAKVAEVVMMETSSEAFNYLSFGLLTALNNLWTWVALLTAALSFWKIRSAGCPKPKPEAQPSIGPDPVTDTLAPTDVTVEKTEPRRQPAVGNGVTEDVDGVRKGKFTVYYEEDTKCTCGERKGFSTAWQEERERSEETEWWERLLRLRNGESENGWYTWQDLTELNGNVVRLWDGGLSGSTTFVRESWYNSSCIHVWSPSDSKLFDKVETPWKMGAYLQKDSNAQVQGRFSSNGIGDRGLLPMPILPHFHPLLDSLVWDPRALKSNILLPYCSNMVTLLQARM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1635 398 MobiDBLite consensus disorder prediction 1 24 - -
Ssu1g1635 398 MobiDBLite consensus disorder prediction 1 32 - -
Ssu1g1635 398 PANTHER PROTEIN, PUTATIVE-RELATED 129 308 - -
Ssu1g1635 398 PANTHER TRANSMEMBRANE PROTEIN 129 308 - -
Ssu1g1635 398 MobiDBLite consensus disorder prediction 49 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1635 Ssu-Chr1 39151588 39163383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1635 - - gmx:100817225 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0557 6 8667443 8667937 Ssu1g1635 1 39151588 39163383 PCT