Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0492 ATGGAAGTTTCACAGATTCAGTTCAACTTTTGGATCTTCTTTTCCAATGCTCTATGTGCTCTAGCCTtgaatttttccattttcttagTAATTGGTAGAACTGGTGCTGTAACCATCCGGGTTGCTGGAGTGCTTAAAGACTGGATATTAATAGCCCTTTCGACCATTATATTTCCAGAGTCTACAATAACTTGGCTGAATATAATTGGCTATGCTATTGCGCTATGTGGAGTTGTGATGTACAATTACATAAAGGTTAAGGATGTCCGCGCCTCTCAATCACCTGCTGAAATTATTCCAGATCGAATCACAAAGGACTGGAAATTCGAGAAGAGGTCATCTGATCTTTATGTGCCAGATAATGTTTGTAACAATGGGGGAGGTGGTGGAGGCAATGGTTCTCTTTCTGATACGAACATTGATGAAGAAGCACCGCTAATTTCTTCATCAAGGTTGTCTCATATTGGACGCATGCAGCTATCCAATCATGCAACAGGAAAATGA 504 0.3929 MEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTIIFPESTITWLNIIGYAIALCGVVMYNYIKVKDVRASQSPAEIIPDRITKDWKFEKRSSDLYVPDNVCNNGGGGGGNGSLSDTNIDEEAPLISSSRLSHIGRMQLSNHATGK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0492 167 Pfam Triose-phosphate Transporter family 11 82 IPR004853 -
Ssu6g0492 167 PANTHER SOLUTE CARRIER FAMILY 35 1 140 - -
Ssu6g0492 167 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0492 Ssu-Chr6 7612272 7613033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g0492 1 164 Organic Solute Cotransporters AT3G17430 75.610 4.12e-80 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0492 - - gmx:100798271 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0492 6 7612272 7613033 Ssu1g1691 1 41299041 41300859 PCT