Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1691 atgCTCCTTCTGTATAGTactaaaattgaaagtttaCTTAGGTATCAAGAACTATTCTCTCTTGATTTTACACATACTTTTTCCACATGCCTACTAATAGCAATAGTTTCGAAGAAACAACTACTTATACCAGTAATATGTAATGTGTTTGGATGCTACAGGTTTGGTAACACTGCCTACTTGCACATTTCTGTGGCTTTTATCCAGATGCTCAAGGCTCTGATGCCAGTGGCAACTTTCCTCATGGCTGTTTTGTGCGGCACTGACAAAGCAAGGTGTGATGTGTTCTTGAACATGTTGCTGGTCAGTGTTGGAGTTGTCATTTCCTCCTATGGggaaattcattttaatatagttGGTACAGTTTACCAGGTCACAGGCATCTTTGCAGAAGCTTTAAGACTGGTCTTAACACAAGTTCTTCTGCAGAAAAAGGGGTTGACTTTAAATCCTATTACAAGCTTATATTACATAGCTCCCTGCAGTTTTATGTTTCTCTTTGTGCCTTGGTACTTACTGGAGAAGCCTGTGATGGAAGTTTCACAGATCCAGTTTAATTTTTGGATCTTCTTTTCCAATGCTATATGTGCTCTAGCCTTGAATTTCTCCATTTTCTTAGTCATTGGTAGAACTGGTGCTGTAACCGTCCGGGTTGCTGGTGTGCTTAAAGACTGGATATTGATAGCTCTTTCAACTGTTATATTTCCAGAATCTACAATAACTGGGTTGAATATAATTGGCTATGCTATTGCACTATGTGGAGTTGTGATGTACAATTATATAAAGGTTAAGGATGTTCGTGCCTCTCAATTGCCTGTTGAAAGTATACCAGATCGGATCACAAAGGACTGGAAATTTGAGAAGAAGTCATCTGATATTTATGTGCCAGATAACATTGGTGACAGTGAGGGAAGCAGTGGAGGTAATGGTACTGCCTCTGATATGAACATTGATGAAGAAGCACCACTAATTTCATCAAGGTTATCTCATATTGGACGTACGCAGCTAACCAACCATGCAACAGGAAAGTGA 1032 0.3837 MLLLYSTKIESLLRYQELFSLDFTHTFSTCLLIAIVSKKQLLIPVICNVFGCYRFGNTAYLHISVAFIQMLKALMPVATFLMAVLCGTDKARCDVFLNMLLVSVGVVISSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFMFLFVPWYLLEKPVMEVSQIQFNFWIFFSNAICALALNFSIFLVIGRTGAVTVRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVVMYNYIKVKDVRASQLPVESIPDRITKDWKFEKKSSDIYVPDNIGDSEGSSGGNGTASDMNIDEEAPLISSRLSHIGRTQLTNHATGK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1691 343 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 36 317 - -
Ssu1g1691 343 Pfam Triose-phosphate Transporter family 38 259 IPR004853 -
Ssu1g1691 343 PANTHER SOLUTE CARRIER FAMILY 35 36 317 - -
Ssu1g1691 343 MobiDBLite consensus disorder prediction 295 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1691 Ssu-Chr1 41299041 41300859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g1691 55 340 Organic Solute Cotransporters AT3G17430 83.566 9.67e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1691 - - gmx:100812996 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1691 1 41299041 41300859 Ssu1g1691 1 41299041 41300859 ECH
Ssu6g0492 6 7612272 7613033 Ssu1g1691 1 41299041 41300859 PCT