Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0440 ATGAGAAGGAGCTCACTTTCTGTGTCCTCTTTTCTACTCCATATTCTTCTTCTATCTCGTATTTTTTTCACACCAACTCATTCCTCTGATGGTGATGGGGATGGTGATTTGGTAGACCAAATATGCAGAAAAACACCCTTTTATGACCTTTGCAGCTCCATCTTACACTCGAATCCTTTAGCCCCCAAAAGTGATCCAAAGGGTATGGCCCTCATAATGGTCAATGACATTCTGGCAAATGCTACTGATACACTGAATTACATTGAAGAGCTGATCAAGCAGACCTCAGACCAACAATTGGAGCAACAATTGGCTTTCTGTGCTGAGTCATACATCCCAATTGTGAAGTACATTCTCCCACAAGCAGCTGATGCCATAAGCCAAGGTCGATTTGGGTTTGCCAGTTACAGCATATTTGATGCTCAGAAGGAAGTAAATGCTTGCGACAAGAAATTTTCTGGCTCAACTCAATCACCCTTAGGTGATAGAAATGACATAATGCAGAAGCTGGTCGATGTGGCTGCAGCCATAGTTAAACTACTATTAAATGGctga 555 0.418 MRRSSLSVSSFLLHILLLSRIFFTPTHSSDGDGDGDLVDQICRKTPFYDLCSSILHSNPLAPKSDPKGMALIMVNDILANATDTLNYIEELIKQTSDQQLEQQLAFCAESYIPIVKYILPQAADAISQGRFGFASYSIFDAQKEVNACDKKFSGSTQSPLGDRNDIMQKLVDVAAAIVKLLLNG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0440 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 181 IPR035513 -
Ssu6g0440 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 182 IPR035513 -
Ssu6g0440 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 181 IPR006501 GO:0004857
Ssu6g0440 184 CDD CIF_like 37 181 IPR034087 GO:0004857|GO:0043086
Ssu6g0440 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 184 - -
Ssu6g0440 184 Pfam Plant invertase/pectin methylesterase inhibitor 36 177 IPR006501 GO:0004857
Ssu6g0440 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 184 - -
Ssu6g0440 184 SMART PMEI_2 33 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0440 Ssu-Chr6 6844569 6845123 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0440 - - gmx:100820305 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0440 6 6844569 6845123 Ssu6g0440 6 6844569 6845123 ECH
Ssu6g0440 6 6844569 6845123 Ssu1g1202 1 26618426 26618992 PCT