Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0375 ATGAAAGTCTTTATGTATGAATTGTGTATCTCCGGAACTCAAACAATAACACGGAGAATGGCAGTCACACATGCTGACCTTGAACCAAGGCGAGGAAAAACAGATTTGGGTAGCAAAACAGGTGCATTCCTTATGGTTCTCACTGTCCTATTGGGCCTATTTTGCTTCATTCTGTGTCTCATAGCAGAAGCCACACGCTCTCAGGTGACATGGATGAGCACAGCTGAAAATGGAAAGGGAAGTAAATCCGAATGTGTTTACAGTGGTAGTGGGAAAATGCCATTGCTATGCGCTGCTTGTGCATTTGTTGGACTAGCAATTGCCATGCTAGTGGAGCACATTTATATGCTGATCGCAGTTAGTAATTCATCACCTGCATTACTTACCTTGGATCCTGATTCTGCTTCTGCCAAATCCTTCACATGGCAAGCTGGGTTTTTCTTCACTACAACTTGGATTTGCTTTGCAGTTGGGGAGATTCTGTTGTTGGTAGGAGTGAGTGTAGAGTCAGGCCATCTGAAGAATTGGTCCAAGCCTAAACCCAGTTGCCTTGCCATCAGAGAAGGGCTGTTCTCTGCTGCAGGGGCGTTTGCTTTAACCACGGTCTTCCTAGCTTCTGCTTTATACCTAACAGCACTACGTGCACTAAGAATATCACAGGAGCAAGAGAATGTTCAACGGGAGGTGCTTGTGACCTCTGCTCTCCATGCTTCTCCACCAAGAGCACCTCAACCACATATCACCACCCTTACTAGGGAGAGCCCCACAACTAGAGAGACTCCATTATCTGTATTTCCAACCCCTTTCAATAAAAGCTACACCTTTGTGTAA 831 0.4549 MKVFMYELCISGTQTITRRMAVTHADLEPRRGKTDLGSKTGAFLMVLTVLLGLFCFILCLIAEATRSQVTWMSTAENGKGSKSECVYSGSGKMPLLCAACAFVGLAIAMLVEHIYMLIAVSNSSPALLTLDPDSASAKSFTWQAGFFFTTTWICFAVGEILLLVGVSVESGHLKNWSKPKPSCLAIREGLFSAAGAFALTTVFLASALYLTALRALRISQEQENVQREVLVTSALHASPPRAPQPHITTLTRESPTTRETPLSVFPTPFNKSYTFV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0375 276 PANTHER OS07G0462200 PROTEIN-RELATED 26 249 - -
Ssu6g0375 276 MobiDBLite consensus disorder prediction 239 262 - -
Ssu6g0375 276 Pfam Protein of unknown function (DUF1218) 101 202 IPR009606 -
Ssu6g0375 276 MobiDBLite consensus disorder prediction 244 262 - -
Ssu6g0375 276 PANTHER OS05G0433100 PROTEIN 26 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0375 Ssu-Chr6 5941578 5943001 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0375 - - gmx:100804457 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0375 6 5941578 5943001 Ssu6g0375 6 5941578 5943001 ECH
Ssu6g0375 6 5941578 5943001 Ssu1g1264 1 28025658 28027412 PCT