Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1264 atgccacagAGAATGGCAGTCACACATGCAGACCTTGAACCAAGCCGAAGTAAAACAGATTTGAGTAGCAAAACAGGCGTCTTCCTTATGGTTTTCACAATCCTAATAGGCCTCTTCTGCTTCATCCTATGTCTCATAGCAGAAGCCACACGTTCTGAGGTGACATGGATGGACACAGGtgggaaagaaaatgaagcCAAATCAGAATGTGTTTATAGTGGTAGTGGGAAAGTGCCATTGCTATGTGCTGCTTCTGCTTTTGTTGGACTTGCATTTGCCATGGTCATGGAACATACTTACATGTTGATAGCAGTGAGTAAATCATCACCTTCTTTGCTTAACTGGGACCCTGATTCTCCTTCTGCCAGGTCCCTAACTTGGCAGGCAGGGTTTTTCTTCATTACAACTTGGATTTGTTTTGCAGTGGCGGAGATTTTGTTGTTGGCAACACTTAGTGTAGAGTCAGGCCATCTGAAGAATTGGTCCAAGCCAAGAACCGGTTGCTATAGCATCAAAGAAGGGTTGTTTTCTGCTGCTGGGGTGTTTGCTTTAACCACAGTTTTCTTGGCTGCTGGTTTATACCTAACAGCACTTCGTGCACAAAGAATGTCAGAAGAACTAGCAAATGTTCGAAGAGAGGTTCTAGAAGCCTCTGCCTTCTATGCTTCCccaccaagatcacctcaacCGCAATATATCTCAACCGTTGCCAGGGAGAACCCCACAACCAGAGAGAGTCAGAATGAGCTTCTATTATCTGTGTTTCCAACTCCATTCATCAAAAGTTATGAGTTTGTATAA 801 0.4145 MPQRMAVTHADLEPSRSKTDLSSKTGVFLMVFTILIGLFCFILCLIAEATRSEVTWMDTGGKENEAKSECVYSGSGKVPLLCAASAFVGLAFAMVMEHTYMLIAVSKSSPSLLNWDPDSPSARSLTWQAGFFFITTWICFAVAEILLLATLSVESGHLKNWSKPRTGCYSIKEGLFSAAGVFALTTVFLAAGLYLTALRAQRMSEELANVRREVLEASAFYASPPRSPQPQYISTVARENPTTRESQNELLLSVFPTPFIKSYEFV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1264 266 PANTHER OS05G0433100 PROTEIN 11 235 - -
Ssu1g1264 266 Pfam Protein of unknown function (DUF1218) 86 187 IPR009606 -
Ssu1g1264 266 PANTHER OS07G0462200 PROTEIN-RELATED 11 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1264 Ssu-Chr1 28025658 28027412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1264 - - lang:109333801 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1264 1 28025658 28027412 Ssu1g1264 1 28025658 28027412 ECH
Ssu6g0375 6 5941578 5943001 Ssu1g1264 1 28025658 28027412 PCT