Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g0352 ATGGCCTCCGATCTGACTCACCCCTCCGATTTCGAAGCCTTAGCCTCCCCAGACGGTTACATCTCCATTTGCGGCTACGGTTCCCTCCTCTCCGAGAGAAGTGCGAGAAGCACTTTCCCCGACCTCGTTAACTTCCGAATCGCGCGGTTAACCGGTTTCCGCCGTGTCTTCACCGCCGTCGGAGACCTCTTTTTCACTCACCGTGTTGCCAATATCAACACCGAgGAGATAGCCGGCCTCTCTACCGAACCTTGTGCAGGTGAAATCATTGATGTAGCTGTTTTTGAGATAAACAAAACAGAGATTCCAGCATTTATTCAAAGGGAGCGCGAATATCGTTTTTTAGCTGTTGTCCCTGAATCACTAGATGGGAAGCCTTTTACCAATCCAGCCGTTCTCTGTGCTTCTTACACTGATGAGgaattctttaaatttagatGCAGTGagGGCAGGGAAATATATTTTCAGCAATACGGAGAATATAAGATCCATAAGATTTGGCGGGATGATATTTTACCATGCCGTGTTTATCTTCGTCACTGTGTCCTGGCTGCAAAAAGCCTTGGGGATGAAGTCTACAATAACTTTTTGGATCATACCTTCCTTGCTGACCGTAGAACGACCATACGTCAATACTTTGAAAAAGTGGGTACAAACATCATGGAAGAAGAGCCACCCGAGTCTTTGAAAACCCGTTATGGTGGTTGA 708 0.459 MASDLTHPSDFEALASPDGYISICGYGSLLSERSARSTFPDLVNFRIARLTGFRRVFTAVGDLFFTHRVANINTEEIAGLSTEPCAGEIIDVAVFEINKTEIPAFIQREREYRFLAVVPESLDGKPFTNPAVLCASYTDEEFFKFRCSEGREIYFQQYGEYKIHKIWRDDILPCRVYLRHCVLAAKSLGDEVYNNFLDHTFLADRRTTIRQYFEKVGTNIMEEEPPESLKTRYGG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g0352 235 PANTHER GAMMA-GLUTAMYL CYCLOTRANSFERASE-RELATED 2 235 - -
Ssu6g0352 235 PANTHER OS05G0358400 PROTEIN 2 235 - -
Ssu6g0352 235 Gene3D - 13 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g0352 Ssu-Chr6 5622700 5626750 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g0352 - - gmx:100527697 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g0352 6 5622700 5626750 Ssu6g0352 6 5622700 5626750 ECH
Ssu6g0352 6 5622700 5626750 Ssu1g1287 1 28334683 28342842 PCT