Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g1287 ATGAACATAGCCACCACGATCATAAGCTTCCCCTTCCAACTCTCACCACTCGCCTCTCGCGCGTCCCTTCAACGCGCCACTCATTCCCTCTCTCTCAcccctcctctttctctctccaaaACCGCCATGTCCTCCTCCGCGGCTCTCCCATCATCCTCTTCGGTCACCGAGCTCAGCGACGAATCCGACTTCGAATCTCTCCTCTCTCCCGGCGGTTACATCTCCATCTGCGGCTTCGGCTCTCTCCTCTCCGAGAGAAGCGCCCGAAGCACTTTCCCCGACTTGGCGAACTTCCGAACCGCCCGGTTGAACAGCTTTCGCCGCGTCTTCGCTCACGTCGCTCCGGTTTTCTTCGAGCGCGGCATTGCCAAGCCTGAAACCATGgaGATTTCGAGCTTGAGTGTGGAGCCGTGTGAAGGAGAAACTCTTGTAGTAACAGTCTTTGAGATCAGAAAATCAGAGATTCCAGATTTTATCAAGAGGGAGCTTGAGTTTCGGTTTCTTGCTGTTCTTCCTGAAACGCTTGATGGCAAGTCTTTTGATTATCCAGCGGTCCTTTGTGCCCGTTATAGTGACGAGGAATTTTTCAACATTAGATGTAAAGGAAACAAGGAAATCTATTTTCAGCAATATGGACAATGGAATATAGATATAATTTGGAGAGATGATGTGTTACCTTGCCGTGTTTATCTTCGACACTGTGTACTAGCAGCAAAGAATCTTGGTGAAACTGCCTACAACAACTTTCTGGATCACACTTATCTTGCTGACCGTAAAACAACCATTCGCGAATACTTGGCAACAACAGGTTCTGGCATCATGGAAGAGCAGCCCCCTGAATCCCTCAAGCACCGCTACGGTGGCTGA 867 0.4844 MNIATTIISFPFQLSPLASRASLQRATHSLSLTPPLSLSKTAMSSSAALPSSSSVTELSDESDFESLLSPGGYISICGFGSLLSERSARSTFPDLANFRTARLNSFRRVFAHVAPVFFERGIAKPETMEISSLSVEPCEGETLVVTVFEIRKSEIPDFIKRELEFRFLAVLPETLDGKSFDYPAVLCARYSDEEFFNIRCKGNKEIYFQQYGQWNIDIIWRDDVLPCRVYLRHCVLAAKNLGETAYNNFLDHTYLADRKTTIREYLATTGSGIMEEQPPESLKHRYGG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g1287 288 PANTHER OS05G0358400 PROTEIN 39 288 - -
Ssu1g1287 288 PANTHER OS05G0358400 PROTEIN 39 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g1287 Ssu-Chr1 28334683 28342842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g1287 - - gmx:100781602 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g1287 1 28334683 28342842 Ssu1g1287 1 28334683 28342842 ECH
Ssu6g0352 6 5622700 5626750 Ssu1g1287 1 28334683 28342842 PCT