Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3106 ATGGAAGCCTTTAGCTTGCTCAAATACTGGAAAGGTGGCGCCGCACTCACCCCTCCCTCCGCCGCCGCCATCCTCTCCCAAAACGACATCGAAACAGACTGCGACGACGGCCCTTTCTTCGACTTAGAGTTGGCGGTACCCGACGAAGACGACACTAATGAAAATCAAAACGACGAAGATAATAACTCAGAGTCAGAGTCAGAGTCAGAGTCAGAGAAAGAGTTCAAGTTCACGCTTTCCCCTACCACTTCCAGCAACGACCGTAGCCTTTCGCTCTCTCCCTCCGACGATTTAATCTTCAAAGGAAACCTGATCCTCAACTCCTCCGAGTCCGAACCTAACTCCAAACCTCAGTTCACCGCGTCGCTGCTAAAATCCGCCACCAAGTTCCGCGTCTTCATGTTGGGCCTCAGGAAGCCCAAGCCCAGCGCCGCTGCCGCTGCCGCTCCAAACCCAAAACACCAACACCCCAAGAAGCCGCGACAGAGAAAGCTTTTCACCGTGAAATTCAAAGCCGAGGAGGTTCCCATCGTGTCCTTGTTCACCAGAGATAACAGCTCGAGAGGCAAAGCCTCGCAAAGCCAGAACACAGAGGAATCGTCACAGGCAGAGATGGTTTCTTCTGGTTCTGAGGAGAAACGCTTAGTGCGGAAGTATTTGAAAATGGTGAAGCCTCTGTACGTGAGGGTTTCCAGAAGGCACGCGGAGAAGCTAAGGATTTCCGAGCAGGTTGACGTGAGTTCGCCGGAGTCGGGTAAAGCTGCCACGCCACCTTCTCCGGCGGCGGAGAAGGTTCCGACGGAAGCTGAGGCTTCTGAAACTGAGGGAACGGCCAACGTGAAGGGCCAGAAACAGGGGAATATTCCCCTGCCTGCGGGTCTACGCAAGCATTTAGGCAAGGGCCGTTCGGTGCCGGCGCCGGAACCGGCGTTGGTCTCTTCCAAACGGCGCGATGATTCGCTGTTGCAGCAACATGATTGGATTCAGGGTGCTATTTTGCATTGCAAGAGGTCCTTCAATGCTTCTGCTGAATGCGAGTCTTCTCATCTGGCACGATCTGTGAGCGATCCATTGCGCGAGACATCACCTGAATTATCTAAAAAATCTACGAATGAAGGCAATGACAAGTGCATTTGA 1137 0.533 MEAFSLLKYWKGGAALTPPSAAAILSQNDIETDCDDGPFFDLELAVPDEDDTNENQNDEDNNSESESESESEKEFKFTLSPTTSSNDRSLSLSPSDDLIFKGNLILNSSESEPNSKPQFTASLLKSATKFRVFMLGLRKPKPSAAAAAAPNPKHQHPKKPRQRKLFTVKFKAEEVPIVSLFTRDNSSRGKASQSQNTEESSQAEMVSSGSEEKRLVRKYLKMVKPLYVRVSRRHAEKLRISEQVDVSSPESGKAATPPSPAAEKVPTEAEASETEGTANVKGQKQGNIPLPAGLRKHLGKGRSVPAPEPALVSSKRRDDSLLQQHDWIQGAILHCKRSFNASAECESSHLARSVSDPLRETSPELSKKSTNEGNDKCI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3106 378 MobiDBLite consensus disorder prediction 361 378 - -
Ssu5g3106 378 MobiDBLite consensus disorder prediction 181 208 - -
Ssu5g3106 378 MobiDBLite consensus disorder prediction 76 93 - -
Ssu5g3106 378 MobiDBLite consensus disorder prediction 181 214 - -
Ssu5g3106 378 MobiDBLite consensus disorder prediction 35 67 - -
Ssu5g3106 378 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 369 IPR039619 GO:0005886
Ssu5g3106 378 MobiDBLite consensus disorder prediction 141 162 - -
Ssu5g3106 378 MobiDBLite consensus disorder prediction 346 378 - -
Ssu5g3106 378 MobiDBLite consensus disorder prediction 35 95 - -
Ssu5g3106 378 MobiDBLite consensus disorder prediction 232 318 - -
Ssu5g3106 378 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3106 Ssu-Chr5 79014988 79016897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3106 - - pvu:PHAVU_002G293900g 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2902 2 90341163 90342465 Ssu5g3106 5 79014988 79016897 PCT