Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2902 ATGGAAGCTTTCACCTTGCTCAAATACTGGAGAGGCGGTGGCGCTGTCGGACTCCCGCCTTCCTCCGACACTCCCACCTCAcgcgccgccaccaccaccaccatcctCACCGCGGTCGAAAACGAAAATGCAACCGAAAGCGACGACGACGACGGCCCCTTCTTCGACTTAGAGTTCACCGTGCCCGACGAAGTCGACGATCCCGAAGAAGACACTCATGAAAATCCAAACGCCAACCACTcccaagaagaagaagaagaagaagaagaagaagaagataacaTTAACATCGAAGAATCTGACGGCGAGGGAGAGTTTAAGTTCGCGCTGTCCCCTTCGAGCAACGATCGTAGCGATCCGAACCTTTCGCTCTCCCCTCCGGAGGATCTGTTCTTCAAGGGAAAGCTGGTGCACCTGGACCCTTCCTCCTTCTCCGAACCTAACTCCAAGCCTCAGTTCACCGCCTCCCTGCTAAAATCCGCCACCAAATTCCGCGTCTTCATGTTGGGCCTCAAGAAGCCCAAGCCCACTGACAAAGACTCCAACAGCGGTTCCGATTCCGCGGCCGCGAATCCGGAGGCCCACAAAGAGAAGAAGCTCTTCACCGTCAAATTCAAAGTGGAAGAGGTACCCATCATGTCTCTCTTCAGCTCCAAAGGGAACAAAACACAGAAGCAAACCTCGGAGGAGCAACCTTCTGAAGAGAAACGTTTCTCCAAGGAAGTAATGCACAAGTATTTGAAAATGGTAAAGCCTCTCTACATTAGAGTGTCGCGCCGGTACGGCGACAAGCTCAGCTTAAGCTCCGGCGGAAAAGCACCGGTTCCGCCGGCTACGGCGGAACCAGAAGGTGGTGGTGAAACCAACGTGAAGAGTAGTACTACTCAAAAACTACCAGCAGGGCTTAGCGTTGTGTGCAAGCATTTGGGGAAGAGCCGTTCGGCGTCCTCGGCGGTGGTGGCGGCGGCTCCGCCGCCGTTTGTGTCATCGAAACGACGCGATGATTCGCTGTTGCAGCAACAGGATGGGATTCAAGGCGCCATTTTACACTGCAAGAGATCCTTCAATGCCTCCAGAGCtgAGTGCGAGTCTTCTCAGCTGCCGCGTTCTGTGAGCCATCCATCGCACGAGATATCCATCAATGAAACCAAAGACAAGCGCCTTTCAACATAG 1173 0.509 MEAFTLLKYWRGGGAVGLPPSSDTPTSRAATTTTILTAVENENATESDDDDGPFFDLEFTVPDEVDDPEEDTHENPNANHSQEEEEEEEEEEDNINIEESDGEGEFKFALSPSSNDRSDPNLSLSPPEDLFFKGKLVHLDPSSFSEPNSKPQFTASLLKSATKFRVFMLGLKKPKPTDKDSNSGSDSAAANPEAHKEKKLFTVKFKVEEVPIMSLFSSKGNKTQKQTSEEQPSEEKRFSKEVMHKYLKMVKPLYIRVSRRYGDKLSLSSGGKAPVPPATAEPEGGGETNVKSSTTQKLPAGLSVVCKHLGKSRSASSAVVAAAPPPFVSSKRRDDSLLQQQDGIQGAILHCKRSFNASRAECESSQLPRSVSHPSHEISINETKDKRLST 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2902 390 Coils Coil 78 101 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 265 297 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 38 128 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 81 99 - -
Ssu2g2902 390 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 383 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 216 241 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 362 390 - -
Ssu2g2902 390 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 2-RELATED 1 383 IPR039619 GO:0005886
Ssu2g2902 390 MobiDBLite consensus disorder prediction 43 71 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 315 339 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 172 195 - -
Ssu2g2902 390 MobiDBLite consensus disorder prediction 362 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2902 Ssu-Chr2 90341163 90342465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2902 - - gmx:100807473 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2902 2 90341163 90342465 Ssu2g2902 2 90341163 90342465 ECH
Ssu7g0842 7 16934703 16935461 Ssu2g2902 2 90341163 90342465 ECH
Ssu2g2902 2 90341163 90342465 Ssu5g3106 5 79014988 79016897 PCT