Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3103 ATGAAGGTGTTTTCTAGGTTCAAATTTCTATCACGAGCAGTGCACGAGGAACAAGAGAGTGAGCATGATGGGGAGAGAAACAAGTACCCTTTGACGGAAGGAAGTTTGTGCACGTCCTTAACGCTAACAGTTTGGAGAAAATCCCTTGTGATTAGTTGTAAAGGATTCACGGTGATCGACTCATATGGAGACCTGGTGTATCGAGTTGACAATTACATCGTGCACCCCAACGAAGTCATTCTTATGGACGCTTCAGGAAACTCTGTCCTCACCATGCGCCGCTGCAGGAAGCTAGGATTAGTAGATAGCTGGTTTGTGTATGAAGGGGAAATGGGGAAGCAGAGTACGAGGAGTAAGTCGGGTAAGTCAAGAGAGAGTCCAGTTTGTTGTGTACGGAAGCGTGTGAATATTTTAGACGGCAAACCCAAGGTTCAGGCCTACGTATACCGCGTAGCCTCGGATTCAGATAAACGACATGCGGCGTTTACAGTTGAAGGTTCCTATGCACATAGGACATGTAAGGTGCTGGATGAGTCCAAGAGGGCCGTAGCTGAAATCAAGAGAAAGGAGGCCAATAGCAAAGACGCCTCTTTCGGGATAGAGATTTTTCAGTTAGTTGTTCACCCTGGGTTTGATCCTAGCTTTGCCATGGCACTCGTTTTACTACTGGATCAAATGTTTTCATAA 687 0.4614 MKVFSRFKFLSRAVHEEQESEHDGERNKYPLTEGSLCTSLTLTVWRKSLVISCKGFTVIDSYGDLVYRVDNYIVHPNEVILMDASGNSVLTMRRCRKLGLVDSWFVYEGEMGKQSTRSKSGKSRESPVCCVRKRVNILDGKPKVQAYVYRVASDSDKRHAAFTVEGSYAHRTCKVLDESKRAVAEIKRKEANSKDASFGIEIFQLVVHPGFDPSFAMALVLLLDQMFS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3103 228 PANTHER PROTEIN LURP-ONE-RELATED 17 11 227 - -
Ssu5g3103 228 Gene3D - 37 228 IPR038595 -
Ssu5g3103 228 SUPERFAMILY Tubby C-terminal domain-like 40 227 IPR025659 -
Ssu5g3103 228 PANTHER - 11 227 IPR007612 -
Ssu5g3103 228 Pfam LURP-one-related 40 221 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3103 Ssu-Chr5 78890109 78891507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3103 - - gmx:100782098 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2898 2 90258670 90259508 Ssu5g3103 5 78890109 78891507 PCT