Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2898 ATGAGGGTGTTTCCTAAGCTCAAATCCCTGTCAAGAGCAGTGCACGAGGAACAAGAGCGTGAGCATGATGAGGAGAAAAACAACGCAGGAGGAAGCTTGTGCACATCCCTAACAGTTTGGAGAAAATCCTTGGTGATGAGTTGCAAAGGATTCACGGTGATTGATTCTTATGGAAATCTGGTGTATCGGGTCGACAATTACATTGGTCGACCCAACGAAGTCATTCTCATGGATGCCTCAGGAAAATCTATCCTCACCATGTGCCGCCGCAGGAAGCTTGGATTGTTAGATAGCTGGTTTGTGTATGAAGGGGAAGTGGGGAACCAGCATACGAGGAGTAACTTGCGTAAGTCATCAAAGAGTCCAATTTGTTGTGTACGGAAGCGTCTGAATATTTTACATGGCAACACCAACGTTCAGGCCTACGTGTACCGCGGAACCTCTCATTCAGATAAACGGTGTGTGGCGTTTACTATCGAGGGTTCCTACGCACAGCGTACATGTAAGGTGTTGGATGAGTGCAGAAGGGTCGTAGCTGAAATCAAGAGGAAGGAAGCCAGCACCAAAGACGTCTCTTTTGGGATAGAGATTTTTCAGTTAATTGTGCACCCTGGCTTTGATCCTGCCTTTGCCATGGCACTCGTCTTACTACTCGATCAAATGTTTTCGTGA 672 0.4688 MRVFPKLKSLSRAVHEEQEREHDEEKNNAGGSLCTSLTVWRKSLVMSCKGFTVIDSYGNLVYRVDNYIGRPNEVILMDASGKSILTMCRRRKLGLLDSWFVYEGEVGNQHTRSNLRKSSKSPICCVRKRLNILHGNTNVQAYVYRGTSHSDKRCVAFTIEGSYAQRTCKVLDECRRVVAEIKRKEASTKDVSFGIEIFQLIVHPGFDPAFAMALVLLLDQMFS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2898 223 Pfam LURP-one-related 34 216 IPR007612 -
Ssu2g2898 223 PANTHER - 14 222 IPR007612 -
Ssu2g2898 223 Coils Coil 7 27 - -
Ssu2g2898 223 Gene3D - 32 223 IPR038595 -
Ssu2g2898 223 PANTHER PROTEIN LURP-ONE-RELATED 17 14 222 - -
Ssu2g2898 223 SUPERFAMILY Tubby C-terminal domain-like 33 222 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2898 Ssu-Chr2 90258670 90259508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2898 - - gmx:100779188 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2898 2 90258670 90259508 Ssu2g2898 2 90258670 90259508 ECH
Ssu2g2898 2 90258670 90259508 Ssu5g3103 5 78890109 78891507 PCT