Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g3081 ATGGCGTCGCAGGAGCACATCGAAAAGATGCAGGCACGGCAGAACTACCGGAATTTATGGCACACCGATCTCATGAGAGCGATTCAGGCCGATACTCCTTATTGTTGCTTCGCGTTGTGGTGTGCACCGTGCGTGTCTTACCTGCTTCGCAAACGAGCTCTTTACAATGACATGTCAAGATACACATGTTGTGCTGGTTACATGCCCTGCAGTGGTAGGTGTGGAGAAAGTAAATGTCCTGAATTTTGCCTATGCACTGAGGTTTTCCTCTGCTTTGGAAATTCAGTCGCCTCAACTCGCTTTCTATTGCAAGATGAATTTAACATTCAAACTACGCAATGTGATAATTGCATTATTGGTTTCATGTTTTGCCTTCAACAAATTGCATGTATATTCTCTATTGTTGCCATGATTGTGGGAAGTGATGAAATTCAAGAGGCTTCTCAGTTGCTATCTTGTTTGGCTGACTTCGTGTACTGCACGGTTTGTGCATGCATGcagACTCAGCACAAGATTGAGATGGACAAGCGTGATGGGTTATTTGGACCCCAACCAGTAATGGCAGTGCCCCATGTTCAACAGATGTCACGCATTGATCAGCCTGTTCCTCCTTCTGCTGGGTATGCACCACAACCTGCCTATGCACCACAACCCGCATTATGGACAGCCCTATGGTTATCCACCTGCCCCACCACCTTCTCAAGGATATCCTGCTCCTGGTTATCCCCCTGCTGCCTATCCTCCACCGGGATATCCCCCTTCTGGCTACCCTAA 774 0.4742 MASQEHIEKMQARQNYRNLWHTDLMRAIQADTPYCCFALWCAPCVSYLLRKRALYNDMSRYTCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMFCLQQIACIFSIVAMIVGSDEIQEASQLLSCLADFVYCTVCACMQTQHKIEMDKRDGLFGPQPVMAVPHVQQMSRIDQPVPPSAGYAPQPAYAPQPALWTALWLSTCPTTFSRISCSWLSPCCLSSTGISPFWLP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g3081 257 PANTHER PLAC8 FAMILY PROTEIN 1 218 - -
Ssu5g3081 257 PANTHER - 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g3081 Ssu-Chr5 78454221 78458782 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g3081 - - gmx:100306088 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2877 2 89983577 89986112 Ssu5g3081 5 78454221 78458782 PCT