Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2877 ATGGCCTCGCAGCAGCACATGGAGAAGATGCAGCTCCGCCAGAACTTCCGCAATCTCTGGCACACTGATCTCTTGAACACAATTCAGGCTGACACTCCTTATTGTTGCTTTGCTCTCTGGTGTGCACCGTGTGTTTCATATCTGCTCCGCAAACGAGCTCTTTACGATGATATGTCAagATACACATGTTGTGCTGGTTACATGCCCTGCAGTGGTCGCTGTGGAGAAAGTAAATGTCCTGAACTCTGCCTTGGTGCGGAGGTTTTCTTCTGTTTTGGAAATTCAGTGGCCTCAACTCGATTTCTGTTACAAGatgaatttaatattcaaaCTACGCAATGTGATAATTGCATTAttGCTTTCATGTTTTGCCTTCAACAACTTGCATgcatattttctattattgcgTTGATTGTGGGAAATAGTGAAATTCGACAGGCTTCTCAACTGCTATCTTGTTTAGCTGACTTTGTCTACTGCACGGTGTGTGCTTGCATGCagACTCAGCATAAGATTGAAATGGACAAGCGTGATGGCAAATTTGGACCCCACCCAGTAATGGGTGTTCCCCGTGTTCAACAGATGTCACGCTTTGATCAGCCAGTCCCTCCTTTTGTTGGGTATGCACCACAACCAGCATATGGACAGGCCTATGGTGGTTATTCACATGCCTAA 675 0.4356 MASQQHMEKMQLRQNFRNLWHTDLLNTIQADTPYCCFALWCAPCVSYLLRKRALYDDMSRYTCCAGYMPCSGRCGESKCPELCLGAEVFFCFGNSVASTRFLLQDEFNIQTTQCDNCIIAFMFCLQQLACIFSIIALIVGNSEIRQASQLLSCLADFVYCTVCACMQTQHKIEMDKRDGKFGPHPVMGVPRVQQMSRFDQPVPPFVGYAPQPAYGQAYGGYSHA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2877 224 PANTHER PLAC8 FAMILY PROTEIN 1 219 - -
Ssu2g2877 224 PANTHER - 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2877 Ssu-Chr2 89983577 89986112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2877 - - ccaj:109801375 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2877 2 89983577 89986112 Ssu2g2877 2 89983577 89986112 ECH
Ssu2g2877 2 89983577 89986112 Ssu5g3081 5 78454221 78458782 PCT