Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2861 ATGTCGAATCTGGATAACACGCTGAATCGGCGGCCATCAAGAAGCGCCGCCATGACGACGTTTTCCCTGGAGGTATTCGACAATGAAGTCGTGCCCTCGTCACTCGCCTCCATTTCGCCCATTCTCAGAGTCGCCAACGAGATAGAGAATGAGCGCCCCAGGGTTGCCTATCTCTGTAGGTTCTATGCCTTTGAGAAAGCACACAGGCTCGATCAGAGTTCCAGCGGGCGTGGCGTCAGGCAGTTTAAGACGTTGTTGCTGCAGCGATTGGAGAGGGACAATCCAACTAGTCTTGCCTCTCGGGTTAAGAAGACAGATGCGAGAGAAATTCAATCTTACTATCAGCAATATTATGAACATTATGTCAGAACTCTCGACCAAGCGGATCAGGCAGACAGAGCCCAGCTCAGCAAAGCTTACCAGACTGCCGGGGTACTATTCGAAGTGCTGTGTGCCGTTAATAAGACCGAGAAGGTTGAAGAAGTTGCTCCTGAGATTATCGCGGCTGCTAGAGATGTCCAGGAGAAGACGGAGATTTATACGCCTTACAATATTCTTCCTCTGGATGCTGCTGGTGCTTCCGTGCCTATTATGCAATTTGAAGAGATTAAGGCTGCTGTTTCTGCGCTTTGGAATACTCGTGGCTTGAACTGGCCTGCTTCGTTCGAGCAACACAGGCAGAAAACTGGAGATTTAGACATGCTTGATTGGCTTAGAGCCATGTTTGGTTTCCAGAGGGACAATGTCAGGAATCAGAGAGAGCATCTGATTTTGCTTCTTGCTAACTCTCATATAAGGCTACACCCTAAACCCGAGCCTTTCAACATGCTTGATGATCGTGCTGTTGATTCAGTGATGAAAGATCTCTTTAAGAATTACAAAACATGGTGCAAATTCTTGGGACGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGAGATACAGCAGAGGAAGTTGCTTTATATGGGCTTGTATCTTCTTATCTGGGGTGAAGCAGCCAATGTTCGCTTCATGCCAGAGTGTCTATGCTACATATTTCACAACATGGCATATGAACTCCATGGTTTGTTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAATATCAAGCCTTCTTATGGTGGTGATGATGAGGCATTCCTGCGTAAGGTTATAACGCCCCTGTACCAAGTAATTGAAAAGGAAGCCAAGAAGAGCAGACATGGAAAGGCTCCACACTCAGCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCATCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTCTTTAAATCAACAAGTGATTTGGCACAGGGAAGAAAGGGTGCTCCAAGAAAATCTGGAAAAACTGGCAAATCAAATTTTGTAGAGACACGATCATTTTGGCACACCTTCCGCAGTTTTGATCGTCTGTGGACCTTTTTTATATTGGGTTTGCAGGTGATGTTCATTATTGCCTGGGAAGGGATTTCAGTGATGGATATATTTCAGAAGGATGTCTTATATAATCTCTCTAGTATATTCATCACAGCATCCATTCTGCGCTTGCTTCAAAGTATCTTGGACCTGATCCTGAACTTTCCAGGCTATCATCGATGGAAATTCACTGATGTGCTAAGAAATATTCTTAAAGTTTTTGTCAGTCTTTTTTGGGTTATCATTCTTCCACTCTTCTATGTTAATTCCTTCAAGGGTGCACCTGAGGGTCAGAAGCAGTTGCTTTcctttttcaaacaaataaaaggcATTCCACCATTGTACATGCTGGCAGTAGCATTATATTTGCTTCCAAATGTACTAGCAGCTGTTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCAGACTGGCACATAGTTAGATTATTCTTATGGTGGTCTCAGCCAAGAATCTATGTTGGAAGAGGAATGCATGAAAGTCAATTTGCTCTCATGAAGTACACTATATTCTGGTTGTTGCTTTTGacttgcaaatttttattcaGCTTTTTTGTTCAgATAAAACCTCTAGTTAAGCCAACAAAGGACATAATGAGCATTCGACATGTTAATTTTGGTTGGCATGAATTTTTTCCCAATGCTCCAAATAACTATAGTGCAGTAGTTGCACTCTGGACTCCTGTACTTTTGGTTTATTTCATGGACACTCAAATTTGGTATGCAATCTTCTCAACATTGTACGGTGGTGTTGCTGGGGCCTTTGATCATCTAGGAGAGATACGCACTCTGGGCATGCTAAGATCAAGGTTTCTGTCATTGCCTGGTGCATTCAACACATGCTTGGTTCCTTCGGATAAGAAGCAAAAAGGGAGATTCTCTTTCTCAAAGCAATTTGCCGAGATTTCTGCAAGCAAAAGAAATGAAGCTGCCAAATTTGCCCAATTATGGAATGAAATTATTTGCAGTTTTCGCGAGGAAGATCTCATAAGTGATAGGAAAGAACCTCACAGCCAATCTCTTCAGGAGATGGATCTTTTGCTGGTTCCTTACTCATTGGGTCATAGTCTGAAAATAATTCAGTGGCCACCATTTTTGCTTGCAAACAAGATTACTGTAGCACTGGATATGGCAACTCAGTTTCGAGGGAGGGACTCTGATCTTTGGAAGCGAATATGCGCAGATGAATATATGAAATGTTCTGTGATTGAATGCTATGAATCCTTTAAACATGTTCTACAAGATTTGGTGACAGGAGAAACTGAAAAAAGtataatttccaTCATCATTAAAGAAGTCGAGAGCAACATCTCAAAGAATACACTCCTTACAAATTTCCGTATGGGCTTTTTACCCTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGGAGATCCAACCAAGCGGGGTACAGTGGTGGTCTTGCTGCAAGACATGTTAGAAGTGGTTACCGATATGATGGTGAATGAAATCAGTGAATTGGCAGAACTTAATCAAATTAGTAAGGACACTGGACGACAAGTTTTTGCTGGTACAGGGGCAAAACCTGCTATACTATTCCCTCCTGTGGTTACAGCACAATGGGAGGAACAGATAAGACGTCTCTATCTACTCTTGACTGTGAGGGAATCTGCCATTGAAGTTCCAACAAACGGCGAAGTACGCAGAAGGGTTGCATTCTTTACCAATTCACTGTTTATGGATATGCCACTTGCTCCTCGCGTACgtaaaatgctctcattcagTGTCTTAACTCCATACTACAGTGAAGAGACTGTATATTCTAAGAATGACATTGAGGTTGAGAATGAAGATGGCGTGTCAATCATATATTACCTTCAAAAGATCTTCCCTGATGAATGGAATAACTTCTTGGAGCGACTTGATTGTAAGAAAGATAGCGAGATATGGGAGAAAGAAGAGAATATATTACAGCTACGTCACTGGGCCTCATTAAGAGGACAAACTCTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCAATAAAGCTCCAGGCATTTCTTGATATGGCCAGTGAAAAAGAGATACTCGACGGCTATAAAGCTATTGCAGTTCCTTctgaggaagaaaaaaagagtcataGATCCTTATATGCCAGTTTAGAGGCTATGGCTGATATGAAATTTACATACGTTGCTACCTGTCAGAACTATGGGAATCAGAAGCGCAGCGGAGACCGCCGTGCGACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAAGTTGAAGAAAGAGAAGGTGGAGAAGTACAGAAAGTTCATTATTCTGTATTGATCAAAGCTGTGGACAATCTTGACGAAGAAATATATCGAATAAAGCTTCCGGGTCCAGCAAAGTTAGGAGAAGGAAAGCCAGAAAACCAAAATCATGCCATCATTTTTACTAGAGGGGAAGCTCTTCAGGCTATTGACATGAACCAgGATAATTACTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTGGAAGAATTTAATGAGGATCATGGAGTGCGCCCAGCCACCATATTAGGTGTTCGTGAGCATATTTTCACTGGaagTGTCTCTTCCTTGGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCGCTAAAGGTTCGATTCCACTATGGCCATCCAGATGTTTTTGATAGAATTTTCCATTTTACCCGTGGAGGAATCAGCAAGGCTTCTTGTGGCATCAATCTTAGCGAGGATATATTTGCTGGATTCAACTCAACACTAAGACGTGGGAATGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGACGTTGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAGCAGACAATAAGCAGGGATATCTACCGACTGGGGCATCGATTTGACTTTTTCCGCAtgctatcattttattttacaaccGTCGGATTTTATGTCAGCTCAATGTTAGTGGCCATCACGGTTTATGCTTTCCTGTATGGCAAATTTTACCTGTCATTGAGTGGATTTGAGGCTGCTATAGTTAAGATAGCTAGGAAAAAGGGAGACGATCCATTAAAGGCAGCAATGGCTTCCCAATCCCTTGTTCAAATAGGTCTTCTGATGACTCTGCCCATGGTCATGGAAATTGGACTAGAGAGAGGATTCAGAAATGCTCTAAGTGACATCATAATAATGCAGCTGCAGCTAGCACCTGTTTTCTTCACTTTCTCACTAGGGACTAAATTGCACTATTATGGGCGCACTCTCCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGTCATGAGAGGTTTGCGGAAAATTACAGGATGTATTCTAGGAGTCACTTTGTAAAAGGGATAGAGCTAGCTATACTGCTTATATGTTATAAGCTTTATGGAGTAGCAACTCCTGATTCAACATCATATGCCCTTCTCTCATTATCAATGTGGTTTTTGGTGTGTTCTTGGTTGTTCAGTCCTTTCCTTTTTAATCCATCGGGATTTGAGTGGCAGAAGATAGTTGAGGATTGGGATGATTGGACAAAATGGATAAGTAGTCGAGGTGGAATTGGTGTTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAACAACAGGAGCATCTGCAGCACACTGGGATTTGGGGTAGGATTTGGGAGGTCATTCTTGCCCTGCGTTTTTTCGTATATCAGTATGGGATTGTGTATCATCTACATGTGGCTAGAGGTGACAAGAGCATCACGGTTTATGCTCTGTCCTGGCTAGTTGTAGTAGCTGTCATAGTCATCTTGAAGACAGTGTCAATGGGTAGAAAGACATTCAGTGCAGATTTCCAGCTGATGTTTCGTCTCCTCAAATTGTTTCTGTTTATTGGAACCGTTGTCATTCTAGTCTTGATGTTTACTCTACTTAGTCTCACAGTTGGAGACATCTTTGCGAGCTTCCTAGCCTTTATGCCGACAGGTTGGGCATTTATACAGATAGCTCAAGCCTGTAGGCCATTGGTGAAGGGAATTGGAATGTGGGGGTCTATCAAAGCTTTATCAAGAGGGTATGAATACGTGACGGGAGTAGTTATCTTTGCACCAGTGGCCATATTGGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGACTGCTATACAACCAAGCTTTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAACAAATAA 5763 0.418 MSNLDNTLNRRPSRSAAMTTFSLEVFDNEVVPSSLASISPILRVANEIENERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNPTSLASRVKKTDAREIQSYYQQYYEHYVRTLDQADQADRAQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYTPYNILPLDAAGASVPIMQFEEIKAAVSALWNTRGLNWPASFEQHRQKTGDLDMLDWLRAMFGFQRDNVRNQREHLILLLANSHIRLHPKPEPFNMLDDRAVDSVMKDLFKNYKTWCKFLGRKHSLRLPQGQQEIQQRKLLYMGLYLLIWGEAANVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPLYQVIEKEAKKSRHGKAPHSAWCNYDDLNEYFWSSDCFSLGWPMRDDGEFFKSTSDLAQGRKGAPRKSGKTGKSNFVETRSFWHTFRSFDRLWTFFILGLQVMFIIAWEGISVMDIFQKDVLYNLSSIFITASILRLLQSILDLILNFPGYHRWKFTDVLRNILKVFVSLFWVIILPLFYVNSFKGAPEGQKQLLSFFKQIKGIPPLYMLAVALYLLPNVLAAVLFLFPMLRRWIENSDWHIVRLFLWWSQPRIYVGRGMHESQFALMKYTIFWLLLLTCKFLFSFFVQIKPLVKPTKDIMSIRHVNFGWHEFFPNAPNNYSAVVALWTPVLLVYFMDTQIWYAIFSTLYGGVAGAFDHLGEIRTLGMLRSRFLSLPGAFNTCLVPSDKKQKGRFSFSKQFAEISASKRNEAAKFAQLWNEIICSFREEDLISDRKEPHSQSLQEMDLLLVPYSLGHSLKIIQWPPFLLANKITVALDMATQFRGRDSDLWKRICADEYMKCSVIECYESFKHVLQDLVTGETEKSIISIIIKEVESNISKNTLLTNFRMGFLPSLCKKFVELVEILKDGDPTKRGTVVVLLQDMLEVVTDMMVNEISELAELNQISKDTGRQVFAGTGAKPAILFPPVVTAQWEEQIRRLYLLLTVRESAIEVPTNGEVRRRVAFFTNSLFMDMPLAPRVRKMLSFSVLTPYYSEETVYSKNDIEVENEDGVSIIYYLQKIFPDEWNNFLERLDCKKDSEIWEKEENILQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMASEKEILDGYKAIAVPSEEEKKSHRSLYASLEAMADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGEVQKVHYSVLIKAVDNLDEEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFNEDHGVRPATILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGISKASCGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTISRDIYRLGHRFDFFRMLSFYFTTVGFYVSSMLVAITVYAFLYGKFYLSLSGFEAAIVKIARKKGDDPLKAAMASQSLVQIGLLMTLPMVMEIGLERGFRNALSDIIIMQLQLAPVFFTFSLGTKLHYYGRTLLHGGAKYRATGRGFVVRHERFAENYRMYSRSHFVKGIELAILLICYKLYGVATPDSTSYALLSLSMWFLVCSWLFSPFLFNPSGFEWQKIVEDWDDWTKWISSRGGIGVPSNKSWESWWDEQQEHLQHTGIWGRIWEVILALRFFVYQYGIVYHLHVARGDKSITVYALSWLVVVAVIVILKTVSMGRKTFSADFQLMFRLLKLFLFIGTVVILVLMFTLLSLTVGDIFASFLAFMPTGWAFIQIAQACRPLVKGIGMWGSIKALSRGYEYVTGVVIFAPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK 1920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2861 1920 Coils Coil 1318 1338 - -
Ssu5g2861 1920 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 6 1919 - -
Ssu5g2861 1920 SMART FKS1_dom1_2 317 433 IPR026899 -
Ssu5g2861 1920 Pfam 1,3-beta-glucan synthase component 1042 1737 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Ssu5g2861 1920 Gene3D - 23 178 IPR023175 -
Ssu5g2861 1920 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 319 430 IPR026899 -
Ssu5g2861 1920 Pfam Vta1 like 37 164 IPR039431 -
Ssu5g2861 1920 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 6 1919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2861 Ssu-Chr5 74963066 74977464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g2861 9 1920 Glycosyltransferase AT1G05570 60.657 0.0 2399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2861 K11000 - gmx:100777985 3611.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2563 1 70221577 70236493 Ssu5g2861 5 74963066 74977464 PCT