Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g2776 ATGAGGAAAGGAACTAAGAGGAAGACGAAGCAGGAACAGGAAGCCAAACACGACGCACCCGAAGAGAACAAGACCAAAGCACCTCCTCGAGCTAAACGAGCCAAGACCTCCAAGCCTCAATCCGAACCTGAGTACTTCGAAGATAAGCGCAACTTGGAAGATTTGTGGAAGGAAACATTCCCCGTTGGAACCGagTGGGACCAATTGGATTCCGTGTATCAATTCAAGTGGGATTTCTCAAATCTAGAAAATGCGTTTGAAGAGGGTGGCGTGTTGTATGGGAAAAAGGTTTACCTATTTGGGTGCACTGAGCCTCAACTGGTCATGTTTAAAGGAGAAAGCAAAGTTGTCTGCATACCTGTTGTAGTAGCTGTTGTATCACCTTTCCCACCATCTGATAAAATTGGGATTAACTCAGTTCAGAGAGAGGCTGAAGAGATAATTCCCATGAAGCAAATGAAAATGGACTGGGTTCCATATATTCCTCTGGAGGATCGAGATAGCCAAGTTGATAGACTAAAATcccaaatatttatcttgagtTGCACCCAAAGAAGGTCTGCTTTAAAACACCTGAAGTTGGATAGATTAAAGAAATACGAGTACTGCTTGCCTTATTTCTATCAGCCATTTAAGGAAGATGAACTTGAACAAAGCACTGAAGTTCAAATAATATTTCCAGCTGAGCCAAAGCCGGTCTTCTGTGAATTTGATTGGGAATTAGATGAACTTGAGGAGTTTACTGATAATCTCATACAAGAGGAGGAGTTATCAGAAGATCAAAAGGATGCCTTCGAGgaatttgtcAAGGAAAAGGTTCGTGAAGCAAAGAAAGCTAATAGAGAGGCAAGGGAAGCTCGGAAAAAAGCCATTGAAGAAATGAGTGAGGAAACTAAAGCTGCGTTTGAGAGTATGAGATTTTACAAGTTCTACCCTGTTCAATCTCCAGATGCTCCTGATGTATCAAATGTTAAGTCTCCATTCATAAACAGGTATTACGGAAAGGCTCACGAGGTTCTGTGA 1023 0.4086 MRKGTKRKTKQEQEAKHDAPEENKTKAPPRAKRAKTSKPQSEPEYFEDKRNLEDLWKETFPVGTEWDQLDSVYQFKWDFSNLENAFEEGGVLYGKKVYLFGCTEPQLVMFKGESKVVCIPVVVAVVSPFPPSDKIGINSVQREAEEIIPMKQMKMDWVPYIPLEDRDSQVDRLKSQIFILSCTQRRSALKHLKLDRLKKYEYCLPYFYQPFKEDELEQSTEVQIIFPAEPKPVFCEFDWELDELEEFTDNLIQEEELSEDQKDAFEEFVKEKVREAKKANREAREARKKAIEEMSEETKAAFESMRFYKFYPVQSPDAPDVSNVKSPFINRYYGKAHEVL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g2776 340 MobiDBLite consensus disorder prediction 7 46 - -
Ssu5g2776 340 Gene3D - 2 78 - -
Ssu5g2776 340 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 1 339 IPR039313 GO:1900034
Ssu5g2776 340 MobiDBLite consensus disorder prediction 1 46 - -
Ssu5g2776 340 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 1 339 - -
Ssu5g2776 340 Coils Coil 266 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g2776 Ssu-Chr5 73619763 73625024 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g2776 - - gmx:100805080 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2776 5 73619763 73625024 Ssu1g2638 1 71785242 71789213 PCT