Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2638 ATGAGGAAAGGAACTAAGAGGAAAGCGAGGCAAGACGAAGAGCCCAAACAAAACAAGAAGCGATCCGCTAAAATTAAACCTCCCAAGCCTGACGAGTACTTTGAGGATAAGCGCAACTTGGAAGACTTATGGAGAGAAACATTCCCTGTGGGAACAGAGTGGGATCAATTGGATTCTGTTTATCAATACAAGTGGAATTTCTCTAACCTTGAAAATGCATTTGAAGAGGGTGGATTACTGCATGGGAAGAAGGTTTATCTTTTTGGTTGCACCGAGCCTCAACTTGTCTGGTTCAAAGATGAAAGCAAAGTTGTCTGCATacctgttgttgttgctGTTGTATCACCTTTCCCACCGTCTGATAAAATTGGGATTAACTCAGTTCAGAGAGAGTCTGAAGAGATAATTCCCatgaaacaaatgaaaatggACTGGGTTCCATATATCCCCCTGGAGGACCGAGAAAGCCAAGTTGATAGATTAAAGtctcaaatatttatcttaagtTGCACCCAAAGAAGGGCTGCACTGAAACATCTGAAGTTGGATCGTGTAAAGAAATACGAGTATTGCTTGCCTTACTTCTACCAGCCGTTTAAGGAAGATGAACTTGAACAGAGCACTGAAGTTCAAATTATATTTCCAGCAGAGCCAAAGCCGgTTTTCTGTGAATTTGATTGGGAATTAGATGAACTTGAgGAGTTCACTGATAAGCTCATACAGGAGGAGGAGTTATCGGAAGATCAAAAAGATACCTTTAAGGAATTTGTCAAAGAAAAAGTACGTGAAGCAAAGAAAGCTAATAGAGAGGCAAGAGAAGCTCGAAGAAAAGCCATTGAAGAAATGAGCGAGGAAACTAAAGCTGCATTTGAGAATATGAGATTTTATAAGTTCTACCCTGTGCAAAGTCCAGATGCGCCTGATGTATCAAATGTTAAGTCTCCATTCATAAACAGGTATTACGGAAAGGCTCATGAGGTTCTGTAA 987 0.386 MRKGTKRKARQDEEPKQNKKRSAKIKPPKPDEYFEDKRNLEDLWRETFPVGTEWDQLDSVYQYKWNFSNLENAFEEGGLLHGKKVYLFGCTEPQLVWFKDESKVVCIPVVVAVVSPFPPSDKIGINSVQRESEEIIPMKQMKMDWVPYIPLEDRESQVDRLKSQIFILSCTQRRAALKHLKLDRVKKYEYCLPYFYQPFKEDELEQSTEVQIIFPAEPKPVFCEFDWELDELEEFTDKLIQEEELSEDQKDTFKEFVKEKVREAKKANREAREARRKAIEEMSEETKAAFENMRFYKFYPVQSPDAPDVSNVKSPFINRYYGKAHEVL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2638 328 MobiDBLite consensus disorder prediction 7 33 - -
Ssu1g2638 328 MobiDBLite consensus disorder prediction 1 33 - -
Ssu1g2638 328 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 1 327 - -
Ssu1g2638 328 Coils Coil 254 288 - -
Ssu1g2638 328 Gene3D - 1 66 - -
Ssu1g2638 328 PANTHER PROTEIN HEAT INTOLERANT 4-RELATED 1 327 IPR039313 GO:1900034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2638 Ssu-Chr1 71785242 71789213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2638 - - gmx:100801162 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2638 1 71785242 71789213 Ssu1g2638 1 71785242 71789213 ECH
Ssu5g2776 5 73619763 73625024 Ssu1g2638 1 71785242 71789213 PCT