Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1198 ATGGACAAAACGCACAGCTCCAGCGCAGAGCAGGATCCGAACGAGACTCACCCGACCCGCCACGACTTGGATCTCCCATCCGGGTTAACCCCCGAAGAGTTTGAGGACCTGAAACCCTCCGTGACGGAGCACCACACCTACCCGGTGGGCACGCGACAATGTTCCTCCCTCCTCGCGCAGCGAATCCAGGCGCCGCCGCACGCGGTGTGGTCCGTGCTGCGCTGCTTTGACAACCCCCAAGCCTACAAGCACTTCATCAAGAGCAGCCACGTCAACGAGGGTTTCGAACTCGCCGTGGGGTGCACCCGCGACGTCACGGTCATCTCCGGGTTACCGGCTGCCACCAGTACCGAGCGCCTCGACCTACTTGACGATGACCGACACGTCATCGGCTTCACCATCGTCGGGGGCGAGCACCGCCTCAGGAATTACCGGTCTGTTACGTCGGTGCACGGGTTAGAGCGCGACGGGAAGATCTGGAGCGTTGTTCTGGAATCGTACGGGGTGGATGTGCCCGAGGGGAACACCGAGGAGGACACGCGTCTTTTTGCTGACACCGTTGTGAAGCTGAATCTGCAGAAGCTCGCGTCTGTCGCCGAAGGGATCAACGGTGACGGTGACGGTAAGTCATAG 633 0.613 MDKTHSSSAEQDPNETHPTRHDLDLPSGLTPEEFEDLKPSVTEHHTYPVGTRQCSSLLAQRIQAPPHAVWSVLRCFDNPQAYKHFIKSSHVNEGFELAVGCTRDVTVISGLPAATSTERLDLLDDDRHVIGFTIVGGEHRLRNYRSVTSVHGLERDGKIWSVVLESYGVDVPEGNTEEDTRLFADTVVKLNLQKLASVAEGINGDGDGKS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1198 210 PANTHER ABSCISIC ACID RECEPTOR PYR1-LIKE 25 208 - -
Ssu5g1198 210 CDD PYR_PYL_RCAR_like 54 200 - -
Ssu5g1198 210 PANTHER - 25 208 - -
Ssu5g1198 210 Gene3D - 12 207 IPR023393 -
Ssu5g1198 210 Pfam Polyketide cyclase / dehydrase and lipid transport 60 200 IPR019587 -
Ssu5g1198 210 MobiDBLite consensus disorder prediction 1 33 - -
Ssu5g1198 210 MobiDBLite consensus disorder prediction 1 28 - -
Ssu5g1198 210 SUPERFAMILY Bet v1-like 55 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1198 Ssu-Chr5 39487343 39487975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1198 K14496 - gmx:100786749 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1198 5 39487343 39487975 Ssu2g1924 2 71643668 71644707 PCT