Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1924 ATGGAGAAAGGCGAGAGCTCCGCCTCCACATCGGAGCCCGACTCCGACGACCACCGCCACCCTACGAGCCACCACCTGAACCCGCCGTCCGGCCTCACCGCGCACGAGTTCGCCTCCCTCGTCCCCTCCGTGACGGAGCACCACACCTACCTCATGGCCCCCGGCCAATGCTCCTCCCTCTTCGCACAGCGCGTCCACGCGCCGCCCGACGCCGTCTGGTCCGTCGTCCGCCGCTTCGACAGGCCCCAGGCCTACAAGCACTTCATCAGGAGCTGCGCCGTCGAGGACCCCTTCCACATGGCCGTCGGCTGCACCCGCGACGTCATTGTCATCTCCGGCCTCCCCGCCGCCACCAGCACCGAGCGCCTCGACCTCCTCGACGACCACCGCCGCGTCACCGGCTTCAGCATCATCGGCGGCGAACACCGCCTCCGGAACTACCGCTCCGTCACCACCGTCCACGGCTTCGACGACGCCAACGCCGATGGCAAGATCTACACCGTCGTCCTCGAGTCGTATATCGTCGACGCCCCCGACGGGAGCACCGAGGAGGACACGCGTCTCTTCGTGGACACCGTCGTCAAGCTCAACCTCCAGAAGCTCGCGTCCGTCTCCGAAGGAACCAACCGTGACGGTGACGGTGTACAGGAAATGTTGACTTGTGATGTTCGTCGTGTCTTTTTAACCGTTCTGTGA 696 0.6566 MEKGESSASTSEPDSDDHRHPTSHHLNPPSGLTAHEFASLVPSVTEHHTYLMAPGQCSSLFAQRVHAPPDAVWSVVRRFDRPQAYKHFIRSCAVEDPFHMAVGCTRDVIVISGLPAATSTERLDLLDDHRRVTGFSIIGGEHRLRNYRSVTTVHGFDDANADGKIYTVVLESYIVDAPDGSTEEDTRLFVDTVVKLNLQKLASVSEGTNRDGDGVQEMLTCDVRRVFLTVL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1924 231 MobiDBLite consensus disorder prediction 1 24 - -
Ssu2g1924 231 PANTHER ABSCISIC ACID RECEPTOR PYR1-LIKE 28 214 - -
Ssu2g1924 231 Pfam Polyketide cyclase / dehydrase and lipid transport 63 206 IPR019587 -
Ssu2g1924 231 CDD PYR_PYL_RCAR_like 57 206 - -
Ssu2g1924 231 PANTHER - 28 214 - -
Ssu2g1924 231 MobiDBLite consensus disorder prediction 1 32 - -
Ssu2g1924 231 SUPERFAMILY Bet v1-like 57 203 - -
Ssu2g1924 231 Gene3D - 21 217 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1924 Ssu-Chr2 71643668 71644707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1924 K14496 - gmx:100788576 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1924 2 71643668 71644707 Ssu2g1924 2 71643668 71644707 ECH
Ssu5g1198 5 39487343 39487975 Ssu2g1924 2 71643668 71644707 PCT