Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1074 ATGACAATGGTTGAAGTTGAGGCTTCAAACAACAAATGCAAGAAGAGCAAATCCACAGGTTTCTCAAAGACGTGGAGATTTCGAGAAAACATGAAGCTTCGAAGCTACAGTGATGGCCAAAATGCTTTTGTTTTCTTGAATCCTTTAGGGTCAATGTCAACGAGGTCCAATGATGCgaaggaaaaaaatgttgtttcaaaGAAAGGAAATGGTGCGAAATGCAAAACAAGTTTGTCACCTCATGAGAAGCTTTATATGATGAATAGAAAGGGGAAGGAAAATAGTAAACGAAAATCATTCTTGCCTTACAGGCAAGACTTGATTGGGTTCTTCACCAACGTTAATGGATTTAGTAGGAACATTATTCCTTTTTGA 375 0.36 MTMVEVEASNNKCKKSKSTGFSKTWRFRENMKLRSYSDGQNAFVFLNPLGSMSTRSNDAKEKNVVSKKGNGAKCKTSLSPHEKLYMMNRKGKENSKRKSFLPYRQDLIGFFTNVNGFSRNIIPF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1074 124 Pfam Protein of unknown function (DUF1645) 8 102 IPR012442 -
Ssu5g1074 124 MobiDBLite consensus disorder prediction 56 75 - -
Ssu5g1074 124 PANTHER DUF1645 FAMILY PROTEIN 1 121 - -
Ssu5g1074 124 PANTHER - 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1074 Ssu-Chr5 33881457 33881831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1074 - - gmx:102668895 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1778 2 68509674 68510462 Ssu5g1074 5 33881457 33881831 PCT