Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1006 ATGGGGGAGAAAGCGGCATCCAGTCCTGCTTTGCAAGTGTCTGTTTCGTTTGGTAGATTTGAGAATGATTCCTTGTCTTGGGAGAAATGGTCTGCCTTCTCACCAAATAAGTATTTGGAAGAAGTTGAGAAGTGTGCCGCACCTGGATCAGTTGCTCAGAAGAAAGCCTACTTTGAAGCTCATTACAAGAATGTTGCAGCCCGGAAAGCCGAATTGCTGGCTCAAGAGAAGCAGATGGAGAAGGATTCTTCTAGGTCACAGTATGAAAATGGTGAAGATCTGAGTTGTAACACTTGTGGGACTGATGCAGAATGTGATGTGTCCAATACTCAAGGTTCTAGTGAAGGGTTTAAGCAAGAAACCAATTCAATTGGTGAGATCATTAGGACCGATGCGAGTAATTTGGAGGATGATGTTGCAGTTTCAAGAGATTATCAAATTTCATCAGTTGAGGAAGAGAATGAAGAACTGGAAAGCAGATCACGTAGTTCACAGATAGATAAACCTGAAGAAGTTGTCTGCGTTGAGCGAGAAGGAAGTAAAGAAGAAAGTCCTAACATTGAAGCCGAAGATGTGAAGGAAATTTCACACAATGTGAACAATGAGAGTGCAAAGGAAATTGAAGCAAAAGATGTGACATTGGATCATCCAAAGGTATCCAAGAAGGTTACCCCTGTGAGCAGAGAAAGCAATGCAGCAAAGGCGAAGAAGAAATCGGTGCTACCTACATCTAAGCCTAAGGCATCCCAAATTTCCACCCCTATAAGTTCAAAGCCTACATCAACTCCCACCAAAACATTGGCCTCTGCCTCTTCAACTAAAAGGGGAAACTCTCCATCAATATCTGGGAGGAAAATTACTCCCACTGCGGAGAGCAGAAAAGTTCCAAATAAATCTTTGTACATGTCCCTTAGCTTGGCTCCAAGCAAACCTGATCCTGCTCTGCATACTACAATGAGAAGATCTTTGATTATGGAAAAAATGGGGGATAAGGACATAGTCAAACGAGCATTCAAGACATTCCAGAACAATTTCAATCTGCCAAAAACTTCTGGTGAAAACAAATCTTTGGTAAAAGAAAAGGTTACTTCAAGGGTGACAGAGCCAAGGAATCCAGCATCTATGGCTTTGCGAAAGGAAAATGGACAGTCACCTAAGGTTGATGGTGCGGATAAAAGAAGTGGCAATGCTGTCCGAAGTACATTTGGCCTAAGAAGTGACGTTAAATCAGAGAAGGGAAAAGAGTCTCcaagaaaaatagatgaaaaatttaATGCAAAAGAGGCAGAAAGAACGCATCCTCAATTGAAATCAAAGgaggaaaagataaaacataattcCAAAGCCACACCCTTGCTAGCTTTTCACCGTGGTCTAAAAGTATCAAAAAGCCATCTAGAAAAGGGGGATGTTAAGATTGAGAAATGGCGGTAG 1434 0.4093 MGEKAASSPALQVSVSFGRFENDSLSWEKWSAFSPNKYLEEVEKCAAPGSVAQKKAYFEAHYKNVAARKAELLAQEKQMEKDSSRSQYENGEDLSCNTCGTDAECDVSNTQGSSEGFKQETNSIGEIIRTDASNLEDDVAVSRDYQISSVEEENEELESRSRSSQIDKPEEVVCVEREGSKEESPNIEAEDVKEISHNVNNESAKEIEAKDVTLDHPKVSKKVTPVSRESNAAKAKKKSVLPTSKPKASQISTPISSKPTSTPTKTLASASSTKRGNSPSISGRKITPTAESRKVPNKSLYMSLSLAPSKPDPALHTTMRRSLIMEKMGDKDIVKRAFKTFQNNFNLPKTSGENKSLVKEKVTSRVTEPRNPASMALRKENGQSPKVDGADKRSGNAVRSTFGLRSDVKSEKGKESPRKIDEKFNAKEAERTHPQLKSKEEKIKHNSKATPLLAFHRGLKVSKSHLEKGDVKIEKWR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1006 477 MobiDBLite consensus disorder prediction 148 223 - -
Ssu5g1006 477 Coils Coil 62 82 - -
Ssu5g1006 477 MobiDBLite consensus disorder prediction 349 449 - -
Ssu5g1006 477 MobiDBLite consensus disorder prediction 405 447 - -
Ssu5g1006 477 PANTHER F3I6.9 PROTEIN 1 468 - -
Ssu5g1006 477 MobiDBLite consensus disorder prediction 145 295 - -
Ssu5g1006 477 Coils Coil 147 167 - -
Ssu5g1006 477 MobiDBLite consensus disorder prediction 243 295 - -
Ssu5g1006 477 PANTHER F3I6.9 PROTEIN 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1006 Ssu-Chr5 31926594 31930949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1006 - - gmx:100306130 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1693 2 66201424 66204968 Ssu5g1006 5 31926594 31930949 PCT