Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1693 ATGGGTGAATTTCTTGTGGATGCGACAGTGTTTGGAGATAAGATGGGAGAGAGTGCTGCTTCCAATCCTGCTTTGCAAGTGTCTGTTTCATTTGGTAGATTTGAGAACGATTCCTTATCTTGGGAGAGATGGTCTTCTTTCTCTCCAAACAAGTACTTAGAAGAGGTTGAGAAGTGTGCCACACCTGGATCAGTGGCCCAGAAGAAAGCTTACTTTGAGGCCCATTACAAGAAGGTTGCTGCCCGGAAAGCTGAATTGCTGGCTCAAGAGAAGCAAAGGGAGAAAGATTCTTTCAGATCAGAAGATCAACATAGAATAGATCTGAGTGGTAACACTAATGCAGAACTTGATGTATCCAACTCTCAAGGTTCCATTGAAGGGGCTAAGCAAGAAGCCAGTTCTGTTGGTGATATCCGTAGGACCCATGTTAATGATTATGAGGAGGAAGTTGTAGTTTCAAGAGATTACCAAAGTTCACCAGTTGAGGTAGAGAACAAGGAACTGGAAAGTAGATCACATAGTTCCTACCAGATAGACGAACCTGAAGATGTATGCATGAAACAAGAGGAAAGTCTTAACATTGAAGCTGAAGATGTGAAGGAAATTTCACACGTTGTGTACAAGGAGATAGGAAAAGCTTCAGAAGTTGaagcaaaagatgtgaaattgGACCATCCAAAGGAATCTAAGGTTAACTCTGTGAGTAGGGGCAGCAATGATGCCAAGACGAAGAAGAAATTAATGCTGCCTACTTCTAAGGCATCAAAAATTTCCACACCAAGAAGTTCAAAGCCTACATTAACTCCTACCAAAACAGTGACACCTACTTCTTCAACTAAAAAGGGAAATTCTCCATCTTTGTCTGGGAGGCAAATTACTTCCAGTGTGGAGAGCAGAAAAGTTTCTAACAAATCTTTGCACATGTCTTTGAGCTTGGCTCCAAGTAATCCTGATCCAACTCCTCACACTACCATGAGGAGATCTTTAATTATGGAGAAAATGGGGGATAAGGACATAGTCAAACGAGCATTTAAGTCGTTCCAGAATAGTTTCAACCAGCCAAAAACTTCTGGTGAAGACAGATCTTTGATAAAGAAACAGGTTCCTTCGAGGGGGACCGTGTCAAAGGTTCCAACAACATCTACAACTTTGAGGAAAGAAAATGgacaGCCAACTAAGGTTGAGAGTCTAGATAAAAGTGGAAATGTCGTACGAACTACTTTGGGTCCAAAAAGTGACATTAGAGCAGAGAAAAGGAGAGAGtcttcaagaaaaatagaggaaaaatcTAATGCAAAAGAGGTAGAAAGAATGcgtcttcaatcaaaattgaagGAGGAAAAAAAGGCAGAGATGAAAAAGCTAAAACATAATGTCAAAGGCAAACCCTTACCAGCTTTTTACCAGGGTCAAAAAGTAGTAAAAAGTCATCCAGAAAAGGGTGATGCTAAAACGAAGCCTCGGTAG 1467 0.3933 MGEFLVDATVFGDKMGESAASNPALQVSVSFGRFENDSLSWERWSSFSPNKYLEEVEKCATPGSVAQKKAYFEAHYKKVAARKAELLAQEKQREKDSFRSEDQHRIDLSGNTNAELDVSNSQGSIEGAKQEASSVGDIRRTHVNDYEEEVVVSRDYQSSPVEVENKELESRSHSSYQIDEPEDVCMKQEESLNIEAEDVKEISHVVYKEIGKASEVEAKDVKLDHPKESKVNSVSRGSNDAKTKKKLMLPTSKASKISTPRSSKPTLTPTKTVTPTSSTKKGNSPSLSGRQITSSVESRKVSNKSLHMSLSLAPSNPDPTPHTTMRRSLIMEKMGDKDIVKRAFKSFQNSFNQPKTSGEDRSLIKKQVPSRGTVSKVPTTSTTLRKENGQPTKVESLDKSGNVVRTTLGPKSDIRAEKRRESSRKIEEKSNAKEVERMRLQSKLKEEKKAEMKKLKHNVKGKPLPAFYQGQKVVKSHPEKGDAKTKPR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1693 488 Coils Coil 81 101 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 133 152 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 346 488 - -
Ssu2g1693 488 PANTHER F3I6.9 PROTEIN 1 480 - -
Ssu2g1693 488 Coils Coil 438 458 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 213 231 - -
Ssu2g1693 488 Pfam Targeting protein for Xklp2 (TPX2) domain 411 472 IPR027329 -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 90 184 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 411 458 - -
Ssu2g1693 488 PANTHER F3I6.9 PROTEIN 1 480 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 160 184 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 90 108 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 213 324 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 252 323 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 109 129 - -
Ssu2g1693 488 MobiDBLite consensus disorder prediction 368 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1693 Ssu-Chr2 66201424 66204968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1693 - - gmx:100810690 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1693 2 66201424 66204968 Ssu2g1693 2 66201424 66204968 ECH
Ssu2g1693 2 66201424 66204968 Ssu5g1006 5 31926594 31930949 PCT