Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0789 ATGATGGAGAAGGCAGATTCTGTAAAGAAGCTATATACGCGAATGAGGCTTTGGGAATTTCCGGATCAGTATGTGATTGAACCAACAGATGGGTCTTCCGGTTCTTCTTTGGCAGTTAGTCGAAAAGATGGCTCCATGAAGCTCATTGATGAGATTCCTGAATGCAGCACCCTTCGAGTTCCTAAGATTTTTACGATTTTTGGTGTGGCTGGGATGCTAAGGCTTTTGGCTGGATCGTATTTGCTGGTTATAACTGGGCGTGAATGTGTTGGATCCTACTTGGGGCATCCAATTTTCAAAGTTTCATCTATGAAGGTTTTTCCATGTGATTGTTCTCTAAATAATACCCCTGCTGAACAGAAGAAGACAGAGATGGAATTTTCTGGGATATTAAATGTTGCTGAGAAAACTACTGGTCTGTTCTTCTCATACGACGCTAATTTAACTCTCagTGCCCAACGACTAAATGACCTTGGTGATGAGTCTAGGTTGCTTCCCCTTTGGAGACAGCCTCGATTTCTATGGAATAATTATTTGTTGGAAGTGCTCATAGATAACCAGCTTGACCCATACTTACTCCCTGTAGTCCAAGGCAGCTTTCATTACTTTCAAGCAGCTATTGGGAAAGAGATTATTGGCATCACTTTAATTGCTAGGAGATGCACAAGAAGAaatgGAACTCGAATGTGGAGAAGAGGAGCTGATCCTGATGGGTATGTGGCTAATTTTGTGGAAACAGAGCAAATTGTGCAACTCAATGGTTATACAGCATCATTTGTTCAGGTTCGTGGTTCAATTCCACTGCTTTGGGAGCAAATTGTTGACTTAACATATAAACCAAAGTATGAGTTATTGAAACATGAGGAAGCTCCCCGAGTCCTAGAGAGGCATTTCttagatttaagaaaaaaatatggggCTGTGTTTGCTGTTGATCTTGTCAATGAGCACGGAGGAGAGGGGAGGCTATGTGAAAAATTCGGAAACACTATGCAACATGTAGCTAGTAATGATGTCAGatatCTGCACTTTGATTTCCATCACATTTGCGGGCACATTCATTTTGATCGTCTCTCAATCCTTTATGATCAAATTTCGGATTTTCTTGAGAGAAATGGATATCTTCTATTGAatgaaaaaggagagaaaatgaaggagCAACTTGGGGTTGTTAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTTACTCAGAGCATGATAGGCCGAAATATGCTAGAATACCAGCTTAGAAGGCTTGGGATCTTTGGTGCTGAAGAAACCATTTGTTCACATCCAAATCTAGATGAAAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTATTCAATATACAGGCACTCCTGCTCTCAAAGGAGATTTTGTCCGATTTGGGCATCGCACAATTCAGGGGATACTAAATGACGGTTGGAATGCCCTTCTGCGCTATTACTTGAATAACTTTTGTGATGGAACAAAGCAGGATGCAATTGATCTGCTGCAAGGTCATTATATAGTTTCTGTCAACCGAGATACGAGATCTTCTTCTCAGAACCAAGGCCTTGAAGCTATTGCTTCATTTCCTCTGGCTTTGGGTCTGGTTTTGACTGGGTTCTTTTTTGCAACCATGTCCTTGAGGCAAGTTAGATATGATTTTCGGCACTTATTCTTCTCGCTAATATGGGCAAGCATTAGTGTTGGTATAGCAGCATTTGTGAAGGCCAATGGTCGGCTTTTCTGCAACAGATCTCGCTTACACAAGCCGCGACGTTGA 1785 0.4034 MMEKADSVKKLYTRMRLWEFPDQYVIEPTDGSSGSSLAVSRKDGSMKLIDEIPECSTLRVPKIFTIFGVAGMLRLLAGSYLLVITGRECVGSYLGHPIFKVSSMKVFPCDCSLNNTPAEQKKTEMEFSGILNVAEKTTGLFFSYDANLTLSAQRLNDLGDESRLLPLWRQPRFLWNNYLLEVLIDNQLDPYLLPVVQGSFHYFQAAIGKEIIGITLIARRCTRRNGTRMWRRGADPDGYVANFVETEQIVQLNGYTASFVQVRGSIPLLWEQIVDLTYKPKYELLKHEEAPRVLERHFLDLRKKYGAVFAVDLVNEHGGEGRLCEKFGNTMQHVASNDVRYLHFDFHHICGHIHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGIFGAEETICSHPNLDESFKILWANHGDDISIQYTGTPALKGDFVRFGHRTIQGILNDGWNALLRYYLNNFCDGTKQDAIDLLQGHYIVSVNRDTRSSSQNQGLEAIASFPLALGLVLTGFFFATMSLRQVRYDFRHLFFSLIWASISVGIAAFVKANGRLFCNRSRLHKPRR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0789 594 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 593 IPR030069 GO:0052866
Ssu5g0789 594 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 593 - -
Ssu5g0789 594 Pfam SacI homology domain 67 350 IPR002013 GO:0016791
Ssu5g0789 594 ProSiteProfiles Sac phosphatase domain profile. 131 457 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0789 Ssu-Chr5 20255968 20290454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu5g0789 2 593 Acyl Lipid Metabolism Gene Families AT3G51460 73.154 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0789 K21797 - gmx:100796999 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0789 5 20255968 20290454 Ssu5g0789 5 20255968 20290454 ECH
Ssu2g2172 2 77697294 77707653 Ssu5g0789 5 20255968 20290454 PCT