Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2172 ATGATGGAGAGGACAGATTCTGTGCAGAAGCTGTACACGCGCATGCGACTCTGGGAATTTCCGGATCAGTATGTGATTGAGCCAACGGATGGATCTTCTGGTTCTTCTTTGGCTGTTAGTCGAGTCGATGGCTCCATGAAGCTCATCGATGAGGTTCCGGAATGCAGCTCGCTTCGAGTTCCtaagatttttacaatttttggtgTTGTTGGGATGCTGAGGCTCTTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAATGTGTTGGATCTTACTTGGGGCATCCAATTTTCAAAGTTTCTTCACTGAAGATTTTTCCATGTGATAATTCTCTTAAAAATACCCCTGCTGAACAGAAGAAAATAGAGATGGAATTTTCTGGGCTGCTTAATGTTGCTGAGAAAACCTCTGGTCTGTTCTTCTcatatgaaactaatttaactcTGAGTGCACAACGATTGAATGACCTGGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTCCTATGGAACAATTATATGTTAGAAGTTCTCATAGATAACAAGCTTGAACCATACTTGCTCCCTGTAGTCCAAGGCAGCTTTCATCACTTTCAAGCAGCCATTGGGAAAGATATTATTGATGTCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGCTATGTTGCCAATTTTGTGGAAACAGAACAATTTATGCAGTTTAATGGATATACTGCTTCATTTGTTCAGGTCCGTGGTTCAATCCCACTCCTCTGGCAGCAAATTGTTGACTTAACTTATAAACCAAAGTTTGAGTTATTGAAACTTGAGGAAGCTCCACGAGTCCTAGAGAGACATTTCTTagatttaaggaaaaaatatgggGCAGTATTAGCTGTTGATCTTGTTAACAAGCATGGAGGAGAAGGGCGATTGTGTGAAAAATTTGGTGATACAATGCAGCATGTGGCTAGTAATGATGTAAGatatcTGCACTTTGATTTTCACCATGTCTGTGGGCACATTCATTTTGATCGTCTCTCAATCCTTTATGATCAAATTTCAGATTTTCTTGAGAGAAACGGATATCTTCTGTTGAatgaaaagggagagaaaatgaaggagCAACTTGGAGTTGTTAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGACATATGTTGGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACCATAAGTTCCCATCCAAATATGGATGAAAGCTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTATTCAGTACTCAGGAACTCCTGCTCTTAAAGGAGACTTTGTCAGATTTGGGCATCGCACAATTCAAGGGATACTACAAGATGGTTGTAATGCTCTTCTAcgatattatttcaataatttttgtgatGGAACAAAGCAGGATGCTATTGATCTCCTGCAAGGACATTATATAGTCTCTGTCAGCCGAGATACAGCTGCCACTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTTCGTTTCCTCTGGCTTTGGGTCTGGTTTTGACTGGATTTCTCTTTGCAACCATGTCATTGAGGCAAGTTCGATATGATTTTCGGCACTTGTTCTTTTCGCTAATGTGGGCGGGCATTAGTGTCGGTATAGCAGCATTTGTGAGGGCCAACGGCCGTGTTTTCTGCAACAGACCTCGCCTACACAATCCCCGGTGA 1788 0.3999 MMERTDSVQKLYTRMRLWEFPDQYVIEPTDGSSGSSLAVSRVDGSMKLIDEVPECSSLRVPKIFTIFGVVGMLRLLAGSYLLVITERECVGSYLGHPIFKVSSLKIFPCDNSLKNTPAEQKKIEMEFSGLLNVAEKTSGLFFSYETNLTLSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLEPYLLPVVQGSFHHFQAAIGKDIIDVTLIARRCTRRNGTRMWRRGADPDGYVANFVETEQFMQFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGDTMQHVASNDVRYLHFDFHHVCGHIHFDRLSILYDQISDFLERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRHMLEYQLRRLGVFGAEETISSHPNMDESFKILWANHGDDISIQYSGTPALKGDFVRFGHRTIQGILQDGCNALLRYYFNNFCDGTKQDAIDLLQGHYIVSVSRDTAATSQKGGLEAIASFPLALGLVLTGFLFATMSLRQVRYDFRHLFFSLMWAGISVGIAAFVRANGRVFCNRPRLHNPR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2172 595 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 595 IPR030069 GO:0052866
Ssu2g2172 595 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 595 - -
Ssu2g2172 595 Pfam SacI homology domain 67 352 IPR002013 GO:0016791
Ssu2g2172 595 ProSiteProfiles Sac phosphatase domain profile. 131 459 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2172 Ssu-Chr2 77697294 77707653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2172 2 595 Acyl Lipid Metabolism Gene Families AT3G51460 76.007 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2172 K21797 - gmx:100796999 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2172 2 77697294 77707653 Ssu2g2172 2 77697294 77707653 ECH
Ssu2g2172 2 77697294 77707653 Ssu5g0789 5 20255968 20290454 PCT