Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0711 ATGAGAAATGTGgttattttttccttcaatgTTTTGCTGCTTTGTGTCTTCATTTCTGCTATAACAAGCTCTAAAAGTGAAGTAACTAGGACAAATGGAGCACAACCATTTTCTTACCATATCAAAGCTGTGGAGTTCATATGGAGTCATTTGGGTTATCAACAAGTGTGGCCAGAAATGGAATTTGGCTGGAGAATTGTTGTTGGAACCTTGATTGGAATCTTTGGAGCGGCATGTGGAAGTGTAGGGGGAGTCGGTGGTGGTGGCATCTTTGTGCCAATGCTAATCCTGATTATTGGGTTTGATCCAAAATCAGCAATTGCTATTTCAAAGTGTATGGTCACAGGTGCAGCCATCTCATCTGTATTCTTCTGCTTGAAGCAAAAGCACCCCACACTTGATCAACCCGTTATTGACTACAATTTGATGCTGCTTATCCAACCCGCACTCTTGCTTGGTATCAGCATAGGAGTTATTTTAAGTGTGATATTTGCTGATTGGATGGTCACTGTTCTTCTGATTATTCTCTGTATAGCGACATCAATCAGGGCATTCTTCAAGGGTGCTGAGACATGGAAAAAGGAAACCAAAGTGAAAAAGGAGACTATCAAGGTTTTGGAGTCTACTGCTACTTGCAGTGGGGAAGAGGATTACAAGTATCTTCCTGGTTGTCCAGATGAAGGGCCTGAAATGGAAACTAGAAAACCTGAGGTGAGCATCCTTGGCAACATTTATTGGAAGGAGTTTGTACTTATTTTGTGTGTCTGGCTCGCATACGTTATCTTACAGATTGGCaaaAATTATACGGTTTCCTGTTCAGTCACATACTGGATACTTATTTTGTCACAGATACCAATTTCTGTAGGATTTTATCTGTACCAAGCAAGATCCCTATATCAGGGGAGATCTGCTGGAGGTCAACACACACATTGGCGATTGCACCATCTATTTCTAGCTAGCATCTGTTCTCTGCTGTCTGGAATTGTTGGTGGACTTCTTGGTACAGGTTCTGGATTTGTCATGGGTCCTTTATTTCTTGAAGTGGGACTTCCTCCACAGGTAGCAAGTGCCACAGCCACTTTTGGAATGATGTACTCATCATCTTTGTCTGTTGTACAATACTACCTTTTGAACCGTTTTCCTGTTCCTTATGCCCTCTTCCTTACCATTGTGGCTTCGATTGCAGCATTCCTTGGACAGCATCTCATTGAGAAGCTTGTTAATATCTTCCAAAGGGcgtctttaattatttttgtcttggCCTTCACAATATTTGTTAGTGCAATTGCATTGGGTGGAGTTGGCATATCAGACATGATCCTGAAGATTCAAAGGCATGAATACATGGGATTTGAGAATTTTTGCATGTAA 1371 0.4041 MRNVVIFSFNVLLLCVFISAITSSKSEVTRTNGAQPFSYHIKAVEFIWSHLGYQQVWPEMEFGWRIVVGTLIGIFGAACGSVGGVGGGGIFVPMLILIIGFDPKSAIAISKCMVTGAAISSVFFCLKQKHPTLDQPVIDYNLMLLIQPALLLGISIGVILSVIFADWMVTVLLIILCIATSIRAFFKGAETWKKETKVKKETIKVLESTATCSGEEDYKYLPGCPDEGPEMETRKPEVSILGNIYWKEFVLILCVWLAYVILQIGKNYTVSCSVTYWILILSQIPISVGFYLYQARSLYQGRSAGGQHTHWRLHHLFLASICSLLSGIVGGLLGTGSGFVMGPLFLEVGLPPQVASATATFGMMYSSSLSVVQYYLLNRFPVPYALFLTIVASIAAFLGQHLIEKLVNIFQRASLIIFVLAFTIFVSAIALGGVGISDMILKIQRHEYMGFENFCM 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0711 456 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 1 456 - -
Ssu5g0711 456 Pfam Sulfite exporter TauE/SafE 70 183 IPR002781 GO:0016021
Ssu5g0711 456 Pfam Sulfite exporter TauE/SafE 310 422 IPR002781 GO:0016021
Ssu5g0711 456 PANTHER CEREBLON 1 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0711 Ssu-Chr5 17451928 17455909 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0711 - - aprc:113847477 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0711 5 17451928 17455909 Ssu1g3313 1 85876963 85880759 PCT