Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3313 atgatgacTGAGTTTGGAATGAGATGGTGGAGGGGTGTGAGAATGGGATCCATATGGGTGTTGTTGTTTGGTTTTGCATCGGCTTTTGTGATGGTTTCCGCAGAAAGAAGCATTATGAAAATGGAAGTGCCGACATTTAATGTTACCCGAGAGCCTGAACAGAGTTTTCTTACCAGAGCTATGAATTTCTTATGGCAAGCTGGGGAATCAGGTTATCATCACGTGTGGCCGGATATGGAATTCGGGTGGCAAATTGTTGTGGGTACTTTTGTTGGGTTTTGTGGTGCGGCGTTTGGAAGTGTAGGCGGTGTTGGTGGAGGTGGCATATTCGTTCCTATGCTAAGCCTTATCATTGGATTTGATGCAAAATCATCCACAGCTATCTCAAAGTGTATGATCATGGGCGCAGCTGTGTCAACTGTTTACTACAACCTTAAGCTAAGGCATCCTACGTTGAATATGCCAATCATCGACTATGATTTGGCACTTCTAATTCAACCAATGCTCATGCTTGGCATCAGCATTGGCGTGGCCTTCAACGTTGTATTTCCTGATTGGATAGTGACTATATTGCTTATTGTTCTCTTCTTAGGCACATCAACAAAAGCATTCTTTAAGGGGGTCGAAACATGGAAAAAGGAAACCATAATGAAAAAGGAGACTGCTAGGCGAAGAGAGTCAAATGGTTCAGGGGCTGAAGTGGAATACAAACCTCTTCCCAGTGGACCAAATGGTGGCACTGAAAAGGACACCAAGGAACATGAGGTGACTCTTCTTGAAAATGTATACTGGAAGGAGTTTGGACTTCTTGTATTTGTTTGGGTTTCATTCCTTGCCCTACAGATTGCCAAGGAAAACTATACGACTACTTGTTCAACATTATATTGGGTACTGAACTTGTTACAGGTTCCGGTCTCAGTTGGGGTAACTGCATATGAGGCAGCTGCCTTGTTCAGTGGACGTAGAGTAATTGCTTCCACAGGAGATGGCGGGAAAGATTTTACTGTTCTCCAGCTAATGATCTATTGTGTCTTTGGTGTACTGGCTGGTGTAGTTGGTGGCTTGTTGGGACTAGGAGGAGGATTCGTTATGGGTCCACTTTTTCTGGAGCTGGGAGTCCCACCTCAGGTGTCAAGCGCCACAGCCAGCTTTGCCATGACCTTCTCCTCATCTATGTCTGTTATAGAATACTACCTGCTGAAACGTTTTCCCGTTCCTTATGGTTCGTGCCCGAGAATTTCTAGTTAA 1248 0.4431 MMTEFGMRWWRGVRMGSIWVLLFGFASAFVMVSAERSIMKMEVPTFNVTREPEQSFLTRAMNFLWQAGESGYHHVWPDMEFGWQIVVGTFVGFCGAAFGSVGGVGGGGIFVPMLSLIIGFDAKSSTAISKCMIMGAAVSTVYYNLKLRHPTLNMPIIDYDLALLIQPMLMLGISIGVAFNVVFPDWIVTILLIVLFLGTSTKAFFKGVETWKKETIMKKETARRRESNGSGAEVEYKPLPSGPNGGTEKDTKEHEVTLLENVYWKEFGLLVFVWVSFLALQIAKENYTTTCSTLYWVLNLLQVPVSVGVTAYEAAALFSGRRVIASTGDGGKDFTVLQLMIYCVFGVLAGVVGGLLGLGGGFVMGPLFLELGVPPQVSSATASFAMTFSSSMSVIEYYLLKRFPVPYGSCPRISS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3313 415 MobiDBLite consensus disorder prediction 219 251 - -
Ssu1g3313 415 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 15 408 - -
Ssu1g3313 415 PANTHER CEREBLON 15 408 - -
Ssu1g3313 415 Pfam Sulfite exporter TauE/SafE 90 208 IPR002781 GO:0016021
Ssu1g3313 415 Pfam Sulfite exporter TauE/SafE 344 398 IPR002781 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3313 Ssu-Chr1 85876963 85880759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3313 - - gmx:100810784 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3313 1 85876963 85880759 Ssu1g3313 1 85876963 85880759 ECH
Ssu5g0711 5 17451928 17455909 Ssu1g3313 1 85876963 85880759 PCT