Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0622 ATGTTTGAGAAGACAATAGACATGTTTGAAAAGGCTGCATATGCTAAGAAGTGTGATCATTTTACTCCTGATGAGATAGAGGAACTCATGCTTAATGTTGGGCCTTTGTGTGTTGTTAAAATCATTTATGACCATTGGCAGCAGAGAAGGCAGAAGAAGGGAATGGCTTTAATACGGCACTTTCAGCCCCCTCTATGGGAAAGatataaaaaacaagtgagGGAGTGGGAAGTAGGCATGGCCAAGAGCAGTGCCCCTTCTAATGGATGCCTGGACAAGGTTACAACTTTGGAGAAGCCGGCCATGTTTGCTTTCTGTTTGAAACCTAGGGGTCTGGAATCACTGAACAAGGGATTGAAACATCGATCCCAAAAGAAGATTTCAGTCTCTGGCCATGCAAACAGTAATCCAGATCAGGATGGCTTCCACACTTTCAGAAGAAGACAGAATGCCTTACCTTTTGGCGATGAAAAGTTCCTATATCAAGGCCACAGTTACGATTCTTTTGATGATTCCTCATTGGCTCTGACCTCACCGAGGGTATTCTTACCTCGTGATGCTGGCAGCTTGAAATACCATTCTACAACTAACGGAATGGGCTGTAGAAATCATATCCCGAAATTTCAAAAGTCCGGATATGATTTGCCTGGTAACAGGCATCACCTTCTTACTGGCCCAAAGAGGCAAGGGATTGAGCAGTTGGATGGTTCAGTCCTTGAGGAGCTAAGACCACGTGATGCCATGGCTGAGGCTCGTTATAAACGTCATGTGGCTAAGTTGAAGAGAGAGAGGGCTAAAAGATTGCTATATAAAGCAGATGTAGCAATTCATAAGGCCATGACTGCTCTAATGACTGCAGAAGCAATGAAAGCTTCTGAGGACTCCCTTGGTGAAATGAAAGCTTCTAAGGACTAA 915 0.435 MFEKTIDMFEKAAYAKKCDHFTPDEIEELMLNVGPLCVVKIIYDHWQQRRQKKGMALIRHFQPPLWERYKKQVREWEVGMAKSSAPSNGCLDKVTTLEKPAMFAFCLKPRGLESLNKGLKHRSQKKISVSGHANSNPDQDGFHTFRRRQNALPFGDEKFLYQGHSYDSFDDSSLALTSPRVFLPRDAGSLKYHSTTNGMGCRNHIPKFQKSGYDLPGNRHHLLTGPKRQGIEQLDGSVLEELRPRDAMAEARYKRHVAKLKRERAKRLLYKADVAIHKAMTALMTAEAMKASEDSLGEMKASKD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0622 304 PANTHER OS01G0179500 PROTEIN 1 295 - -
Ssu5g0622 304 MobiDBLite consensus disorder prediction 124 143 - -
Ssu5g0622 304 PANTHER PHD FINGER PROTEINS 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0622 Ssu-Chr5 14386917 14388620 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0622 - - gmx:100789801 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0622 5 14386917 14388620 Ssu1g3395 1 87491227 87496976 PCT