Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3395 ATGGAAGATAGAGAAGAGAACTCCCATGGTACTGCAATTCCCAAAAAATCGAGATCTTTGGATCTGAAGAGTTTGTATAAATCAAAAGTGACAAAAGAGACTCCGAAAAAGAGCTTAAAGAGGAAAGGGAGTCATCCTGGGGGCGTTGATgagaaaaggaacaagaaaaaaaagactaGAAAGGAAGTGTCTCTAAGTAGCTTAGAGAATGCTGATGTTGGCCTCAAGAAGGTTGATGAAGAATGTCAAAAAGGGCCTGGTTCTGGTAGGCAGGATTTATGTGGACAAAGGTTGGAGCCAAAGCAGGGGTTGAGTAGCAATACTGGGCTTAATAGAGGTTCActgaattttgatgaaaatgttcACATTCCAAAGCGAAGGAGGGATTTTGTGGGGAGAAAGAAATTTGAAGTTGGTCCAGCAACAAAACTGGCTGGGCAGGCTAGTAGTACAAGTGGCCATGGTGATCAGATACCTAAGTTAAGTAGTGATGATTTGGACAGGAGGATTGAGTCTTCAAAGATTAAACAGAAAAGAAACTTTGATGAGTTTAAGGAAAGCAGGAGTAATTCTGCTGTAAATAGTGGTGATTCCTCTTTAAAGAAGTCACGGAAGAAGGATAGAAAGCAAAAGGCTTTGGCTCCAGATAGAAATAGGGTTGCCAAGGAGGTTAAGCCTCTGATTGATGGTAGTAAAATTTCTGATTATTTGCGGGAAGATGAGGAGGAGAATCTTGAGGAGAATGCAGCAAGGATGCTGTCTTCACGGTTTGATCCAAATTATACTGGATTTTGTTCAAGCAGTAAGCCTTCTACACTGCCATCATCAAATGGTTTGTCCTTTTTACTCTCTTCCAGTCGAAATATTGATAGTTGTGGGTCAAAGTCTCAGTCAGGTTCAGAATCAGCATCAGTTGATACAGCTGGCAGAGTCTTGAGGCCGAGGAAAcaatacaaagaaaaaggtAATTCCCGGAAGAGGCGgcatttttatgaaatttcattAGGTGATTTAGATGAACAATGGATACTGAACCAGAGAATTAAGGTTTTTTGGCCTTTGGACCAAAGTTGGTATCATGGCCTTGTCGATGACTATAACAAAGAAACAAAGTGTCATCATATCAAATATGACGATCGAGAAGAAGAGTGGATTAATCTCCAAACTGAGAGGTTCAAACTCCTGCTACTTCCAAGTGAAGTTCGTGGAAAATCAGGGAAAAAAAGAGCAGTAAGGAAAAATAGAAGTTCTGGTCAGCAAAAAGGGAGCTTGTTCAGCAAAGAAAGGCAAACAAGAGATGTGAGTACTGAGGATGATAACTGTGGTGAAAGCTGTATGGACACAGAGCCTATAATCTCTTGGTTGGCTCGATCTTCTCTTCGGTTTAAATCTTCTGCTTTTCATAGcactaagaaaaagaaaacttctgTTATGCTTCCAAGTACTGCGTCATCATTGTTGTGTGATGAACCTGTAAAAGTACAGAAGTGCTTAGCTGAGAGTTCCCCGAGGGAGGGTAAAAGCAGCCTTTCCAGAGATTCTGTATCAGAAGATAAATTAGGTGATAACTTTGGGAAGAATTCGCCATTGCAAAGCTTCAATTGCCCTAAAGAAGACAAGCAGCCTATTGTCTATTTTAGAAGGCGGTTTCGCAAGCCAACTCCAATATCACCTCATATTTCTGAAGATAAACATGTTGATCCAACTGCATCTTGTTCCATTTCCTTTGATCCTGTGGTTGGTGGGCTTATGGATGTAAAAGAACCAAATGATGGGAGGGTTGAGACTGGGGGGCCATTGTGGTTCACACATAATGTGGGggtatctaaaattttttttgacacaaGTTCAGCAGCATTCAAGTTTGACTTAAACTATCCAATACAATTGGTGCTGAATGACTTGTTTAAATCAGAGAATTTGTGGTTGCTCCGTGCTATTCTGCTACTTCAGTATGGTACAGTTATGACCTTGTGGCCAAGAGTTCATTTGGAGATGCTTTTTGTTGACAATGTGGTTGGGCTAAGGTTCCTCTTATTTGAAGGCTGCTTGATGATGGCTGCAGCCTTTGTCTTTTGTGTCCTTAGGTTATTTCATCAACCTGCTGACGAAGAGAAATATATTGACTTGCAGTTGCCTGTTACATCTATCAGATTCAGGTTTTCGAGTGTTTATGGCATTAAGAAGCCTCTTGTGTTTGCGTTTTACAATTTCTCCAGTGTGAAGAATTCAAAATGGATGTATTTAGATTCGGAACTTAAGAGACATTGCTTGCTCAGTAAGCAGCTCCATCTTTCTGAATGTACATATGATAACATCCAGGCATTTCAAAATCAGTCAAGCGAGTATCCAATTTCTTCCATCAGAGGCAACCCCTTAGTCAAGGTCATGCAGAAGAGAACTAGGCCGGGGATTAACATTATGGGTATTTCCAGAGAGTTATCACAGGCTGATACTAGTCAATCTTCTGATGCTGGCAAGAGGAAGATTCCTccattttcactttctttttctgctgCACCTACATTTTTTCTTAGTCTGCATCTTAAGTTGCTGATAAAAAAGTCAGTAGCTCATATAAGCTTTTGTGATAATGCACCGGTAGATGATCAGGAAGACTCTGGTCTGATGACAGATGACTGCTCTAGCATTGATGATTGCTCTATCAGGAATGCagaatttaatgtgaaaaaaaatatgatgactATGTCAAAGGATGCTGTGCGTGATGAATTGACTTGTGCTGAGTCAGATTTGTTAATTGGTCCATCTAATTGCAGTGATCAAATTCTCTCTGAAAATTACCAGAATATTGATCTTAGTGCTGGTAGAACTTCTGGATTGGATAGTTCTGAGAGGCCTCCTACCGTTCAGTTACCAGAGTGGCAATCACGTCATTCTAACCACCCTTTTCCTTCAAATTCTTTAACCGATAAGATTAAAGCCGATGATGGTTCCCATTCTTTTCTGTGCGATCTGAGTGTTCGAATTCCTTCAGTTGATCAATTTGAGAAGCCTTGTGATGTTGATTTGCGTGATGCTCAACACTCTTCTGATTTTTCCTGGAATACAAATGGAGGTGTCATTCTCAGCCCCAATCCAACTGCTCCCAGAAGCTCTTGGCATCGGAACAGAAATAATTCCTCATCATTTGGATTCCAGTCGCATGGGTGGTCTGATGTGAAGGCTGACTCTCTTCACAATGGTTTTAGCAGTGGACCTAAGAAACCACGAACGCAAGTATCTTATTCAGTGCCTCTTTCTGGGCATGATTATAATTCAAGGCACAGAAGCCATTATCAGAGACAGAGAGGATTGCCGCACAAGCGAATTAGAAAGGCTAATGAGAAGAAGTCATTGGATGTTGCTAGGAGTCCTGAAAAGAATTTGGAGTCCTTATCTTGTGATGCAAATGTGTTGATTACCCTTGGTGATAAGGGGTGGAGAGAATCTGGTGCCCGAGTTGTACTAGAATTGTTTGATCATAATGAGTGGAAACTTTCTGTAAAACTTGCAGGTATTACAAGGTATTCATACAAAGCACATCAGTTTCTGCAGCCTGGATCAACAAATCGTTACACCCATGCTATGTTGTGGAAAGGAGGGAAGGATTGGATCTTAGAATTTCCTGATCGGAGTCAGTGGGCAGTTTTCAAGGAGATGCATGAGGAATGCTACAACCAGAACATCCGTGCTGCTTCGGTTAAAAATATACCTATTCCTGGTGTTGTCttgatagaagaaaattttgataatgaATCCGAAGCTGCTTTTGTTCGGAGCTCTAAATATTTTCGACAAGTTGAAACAGATGTAGAGATGGCTCTGAATCCATTGCATGTCTTGTATGATATGGATAGCGAGGATGAGCAGTGGATTTTGACTACTCGAAATTCTGAAAAAGACAACGGTTTCTTGGATGGGATCTCTGATAAGATGTTTGAGAAGACCATAGATATGTTTGAGAAGGCTGCATATGCTCAGCAGCGTGATCAGTTTACACCTACTGAAATAGAGGAACTAACTGTTGATGTTGGGCCCTTGTGTGTAACCAAAACCATTTATGAACATTGGCAGCAGAAAAGGGAGAAGAAGGGAATGCCTTTAATACGGCATTTTCAGCCACCTCTATGGGAAAGATATCAACATGAATTGAGAGAGTGGGAAATAGCCAtgaccaaaaataatattccCATTTCTAATGGGTGCCTGGACAAAATTGTGACTTTGGAGAAGCCGGCTATGTTTGCTTTCTGTTTGAAACCGAGGGGTTTGGAAGTACCGAACAAAGGATCAAAACATCGatcacaaaagaaaatttcagtCTCAGGGCATTCAAACAGTATTCTATATGAACAGGATGGGTTCCACACTTATGGAAGAAGATTCAATGGATTGGCATATGGCGATGAAAAGTTTGCATACCCAGGGCATAATTATGATTCTGTGGATGATTCCCCATTACCTCAGACCTCCTCGATATTCTCACCACAGGATGCTGGCAGCATGGgatattattctataaataacAGTTATGAAAGAAATCATATTCCCAAATATGACAGACACAAGTCAAGGAAATTTGGCTCATTTGGGTTTCATAATGATTCATGGATGACTTCCTATAATCAGAGAATTTCATGGTCAGGGAGGAGAAATGGGGATAGTAGGTGGAATGTCGGCTATTATGACTTGGCAGGTCACAGGCAGTACCTGTTGGATTGCCCTCAGAGACATGGGATTGAACAAATAGATGGTCCAGACCACGATGAGTTTAGAAAGCGTGATGCCTTGGGAGCTGCTCAGCATGCAGTTAACATGGccaaattgaagagagagagagctcaGAGATTGCTTTATAGAGCGGATCTAGCAATTCACAAGGCTGTGGTTGCTCTTATGACTGCTGAAGCAATGAAAGCTTCTGAGGATTCAAATGGTGATGGGTAG 4950 0.3929 MEDREENSHGTAIPKKSRSLDLKSLYKSKVTKETPKKSLKRKGSHPGGVDEKRNKKKKTRKEVSLSSLENADVGLKKVDEECQKGPGSGRQDLCGQRLEPKQGLSSNTGLNRGSLNFDENVHIPKRRRDFVGRKKFEVGPATKLAGQASSTSGHGDQIPKLSSDDLDRRIESSKIKQKRNFDEFKESRSNSAVNSGDSSLKKSRKKDRKQKALAPDRNRVAKEVKPLIDGSKISDYLREDEEENLEENAARMLSSRFDPNYTGFCSSSKPSTLPSSNGLSFLLSSSRNIDSCGSKSQSGSESASVDTAGRVLRPRKQYKEKGNSRKRRHFYEISLGDLDEQWILNQRIKVFWPLDQSWYHGLVDDYNKETKCHHIKYDDREEEWINLQTERFKLLLLPSEVRGKSGKKRAVRKNRSSGQQKGSLFSKERQTRDVSTEDDNCGESCMDTEPIISWLARSSLRFKSSAFHSTKKKKTSVMLPSTASSLLCDEPVKVQKCLAESSPREGKSSLSRDSVSEDKLGDNFGKNSPLQSFNCPKEDKQPIVYFRRRFRKPTPISPHISEDKHVDPTASCSISFDPVVGGLMDVKEPNDGRVETGGPLWFTHNVGVSKIFFDTSSAAFKFDLNYPIQLVLNDLFKSENLWLLRAILLLQYGTVMTLWPRVHLEMLFVDNVVGLRFLLFEGCLMMAAAFVFCVLRLFHQPADEEKYIDLQLPVTSIRFRFSSVYGIKKPLVFAFYNFSSVKNSKWMYLDSELKRHCLLSKQLHLSECTYDNIQAFQNQSSEYPISSIRGNPLVKVMQKRTRPGINIMGISRELSQADTSQSSDAGKRKIPPFSLSFSAAPTFFLSLHLKLLIKKSVAHISFCDNAPVDDQEDSGLMTDDCSSIDDCSIRNAEFNVKKNMMTMSKDAVRDELTCAESDLLIGPSNCSDQILSENYQNIDLSAGRTSGLDSSERPPTVQLPEWQSRHSNHPFPSNSLTDKIKADDGSHSFLCDLSVRIPSVDQFEKPCDVDLRDAQHSSDFSWNTNGGVILSPNPTAPRSSWHRNRNNSSSFGFQSHGWSDVKADSLHNGFSSGPKKPRTQVSYSVPLSGHDYNSRHRSHYQRQRGLPHKRIRKANEKKSLDVARSPEKNLESLSCDANVLITLGDKGWRESGARVVLELFDHNEWKLSVKLAGITRYSYKAHQFLQPGSTNRYTHAMLWKGGKDWILEFPDRSQWAVFKEMHEECYNQNIRAASVKNIPIPGVVLIEENFDNESEAAFVRSSKYFRQVETDVEMALNPLHVLYDMDSEDEQWILTTRNSEKDNGFLDGISDKMFEKTIDMFEKAAYAQQRDQFTPTEIEELTVDVGPLCVTKTIYEHWQQKREKKGMPLIRHFQPPLWERYQHELREWEIAMTKNNIPISNGCLDKIVTLEKPAMFAFCLKPRGLEVPNKGSKHRSQKKISVSGHSNSILYEQDGFHTYGRRFNGLAYGDEKFAYPGHNYDSVDDSPLPQTSSIFSPQDAGSMGYYSINNSYERNHIPKYDRHKSRKFGSFGFHNDSWMTSYNQRISWSGRRNGDSRWNVGYYDLAGHRQYLLDCPQRHGIEQIDGPDHDEFRKRDALGAAQHAVNMAKLKRERAQRLLYRADLAIHKAVVALMTAEAMKASEDSNGDG 1649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 943 975 - -
Ssu1g3395 1649 Pfam Enhancer of polycomb-like 1228 1323 IPR019542 -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 160 186 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 1067 1108 - -
Ssu1g3395 1649 Gene3D - 343 390 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 506 520 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 1 225 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 144 158 - -
Ssu1g3395 1649 PANTHER OS01G0179500 PROTEIN 2 1648 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 499 536 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 1025 1047 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 199 225 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 1072 1091 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 100 115 - -
Ssu1g3395 1649 SMART TUDOR_7 340 398 IPR002999 -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 119 136 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 405 442 - -
Ssu1g3395 1649 PANTHER PHD FINGER PROTEINS 2 1648 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 943 978 - -
Ssu1g3395 1649 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3395 Ssu-Chr1 87491227 87496976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3395 - - vun:114163981 2744.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0622 5 14386917 14388620 Ssu1g3395 1 87491227 87496976 PCT