Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0430 ATGGGTCTTGAAGCGGCAGTGGCACGCGCCTCCGTGTTGATCGACGCGCCGGGGGAAGATGCGGCGGAGGAGCAGTGTAGTACGTCGTCGTCGTCGATCGGGAGGAACAGCGACGTGTCGTCGGAGAGATCAATGGAGGAGGGAGAAAACGAGGTAGAGAGTGCGTACCATGGACCTTTGCATGCCATGGAAACCTTGGAAGAGGTTCTTCCCATCAGGAGAGGCATCTCGAAGTTCTATAATGGCAAGTCTAAGTCATTCACGACCCTGGCTGATGCTGCGTCTTCCCCATCAGTGAAAGACATTGCAAAGCCAGAGAATGCATACACCAGGAGGCGTAGGAATTTGATGGCACTGAATCATGTTTGGGACAGGAACCGAAATTACCCTCTGAGAAGCAGCGGTGGTGGCATTTGCAAGAGATCAATCAGCTTGAGTAGAAGTGCTCTGGCTCTTGCGGTCGCCATGAACAATTCTGACAGCAGCAGTAGTATCACTAGCGAAGATTCTGGTTCCAGCTCAAATTCGTTACCCTCACCCTCACCCTCACACTGCCACCACTTCATCCGCGAAATAGAGTCTCTCCACTGCAGAATTTCTCTTCCTGGAGATCATTTTCCTTGGCTGATCTACAGCAGCATTGTGCCATTGCTGCAACAATAA 663 0.5173 MGLEAAVARASVLIDAPGEDAAEEQCSTSSSSIGRNSDVSSERSMEEGENEVESAYHGPLHAMETLEEVLPIRRGISKFYNGKSKSFTTLADAASSPSVKDIAKPENAYTRRRRNLMALNHVWDRNRNYPLRSSGGGICKRSISLSRSALALAVAMNNSDSSSSITSEDSGSSSNSLPSPSPSHCHHFIREIESLHCRISLPGDHFPWLIYSSIVPLLQQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0430 220 MobiDBLite consensus disorder prediction 160 180 - -
Ssu5g0430 220 PANTHER MYOSIN LIGHT CHAIN KINASE DDB_G0279831 ISOFORM X1-RELATED 21 179 - -
Ssu5g0430 220 PANTHER OS08G0516900 PROTEIN 21 179 - -
Ssu5g0430 220 MobiDBLite consensus disorder prediction 23 39 - -
Ssu5g0430 220 MobiDBLite consensus disorder prediction 40 54 - -
Ssu5g0430 220 MobiDBLite consensus disorder prediction 16 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0430 Ssu-Chr5 8870771 8872323 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0430 - - gmx:100499733 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0430 5 8870771 8872323 Ssu5g0430 5 8870771 8872323 ECH
Ssu1g3579 1 91058197 91059260 Ssu5g0430 5 8870771 8872323 ECH