Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3579 ATGAGTGTTAGTGGCTTCGGTGTTTGGATGGAAGCATCGGCGCTGTTTGAGGCTGAAGATGAGGACGAGCACTGCTCATCTTCAGCTACTTCGTCCATCGGGAAGGACAGCGAGACAGAGTGCGCTGCCGCTGACAATGACAATGAGGCTCACAGTGCTGATGAACCTTTGGACACCATGGACTCACTTCAACAGGTTCTGCCCATCAGGAGGGGCATCTCAAAGTTCTATGATGGCAAGTCCAAGTCCTTTACCAGTCTGGCAGATGCTGTTTCTTCCCCATCTGTAAAAGATATTGCAAAACCAGAGAGTGCTTACACGAGGAGGCGTAGAAATTTGATGGCCTTCAATCACATTTGGGAAAAGAGTCGAAACTTCCCTTCAAGAAGCAACACTGGTGGCATTTCTAAGAGGACAATAAGCTCGAGCCGAAGTGCCGCGGCTCTTGCTTTTGCCATCAACTATGACAGCAGCAGTAGTTGTGCGAGCGAGGATTCATCATCAAGCTGGAATTCAAGGTCGCCCCCACCTTTTCCACCCCTCCATCCCCGAAATCAAGTATCCAGTGCAAGTACAGGTCCAACCTCTCCTACGCAGCAAAGTTTCTCAGCCTGGTAA 618 0.5 MSVSGFGVWMEASALFEAEDEDEHCSSSATSSIGKDSETECAAADNDNEAHSADEPLDTMDSLQQVLPIRRGISKFYDGKSKSFTSLADAVSSPSVKDIAKPESAYTRRRRNLMAFNHIWEKSRNFPSRSNTGGISKRTISSSRSAAALAFAINYDSSSSCASEDSSSSWNSRSPPPFPPLHPRNQVSSASTGPTSPTQQSFSAW 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3579 205 MobiDBLite consensus disorder prediction 40 56 - -
Ssu1g3579 205 PANTHER OS08G0516900 PROTEIN 3 205 - -
Ssu1g3579 205 MobiDBLite consensus disorder prediction 158 205 - -
Ssu1g3579 205 PANTHER - 3 205 - -
Ssu1g3579 205 MobiDBLite consensus disorder prediction 158 172 - -
Ssu1g3579 205 MobiDBLite consensus disorder prediction 184 205 - -
Ssu1g3579 205 MobiDBLite consensus disorder prediction 18 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3579 Ssu-Chr1 91058197 91059260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3579 - - cam:101499695 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3579 1 91058197 91059260 Ssu1g3579 1 91058197 91059260 ECH
Ssu1g3579 1 91058197 91059260 Ssu5g0430 5 8870771 8872323 ECH