Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0425 ATGGAGGACTTCAACTACAACAGATCAAGGTCTCATGGAAATGGGCAAGTGATGCAGATGGAGAGGTACTATGGAGGAGCACCAAGGCCTTATGATCTCAGGTCCTACAGTGTTTCCTATGCACAAGCTCAAATGGCTCCTAACAAGGACTTGAACAAAGGAAAAGGCATATCCAGGACTTCTATTTCCAAGTCTTGGAGCTTTGCTGATCCTGAGTTTCAAAGGAAGAAGAGAGTTGCTAGCTATAAAATGTATTCTGTGGAAGGAAAGGTCAAAGGCTCCTTTAGGAAGAGCTTTAGGTGGCTTAAGGAAAGGTACTGGCAAGTGGTTTATGGCTGGTGGTGA 345 0.4464 MEDFNYNRSRSHGNGQVMQMERYYGGAPRPYDLRSYSVSYAQAQMAPNKDLNKGKGISRTSISKSWSFADPEFQRKKRVASYKMYSVEGKVKGSFRKSFRWLKERYWQVVYGWW 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0425 114 PANTHER DUF3511 DOMAIN PROTEIN 1 113 - -
Ssu5g0425 114 Pfam Domain of unknown function (DUF3511) 68 112 IPR021899 -
Ssu5g0425 114 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0425 Ssu-Chr5 8758218 8758562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0425 - - gmx:100780149 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0425 5 8758218 8758562 Ssu1g3620 1 91679473 91679811 PCT