Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3620 ATGGAGGACTTTCAAAGATCAAGGTCTTATGCAAATGGGCAGATGATGCAGATTGAGAGGTACTATGGAGCTCCTAGGCCTTATGATCTCAGAAGTTATAGTGCTTCCTATGCACAAACTCAAATTGGCCCTCGGGACTTGAAGTTGAAGAAAGGGAAAAGCATTTCCGCAGGGTCTTCTTTCTCCAAGTCTTGGAGCTTCGCTGATCCTGAGCTTCAGAGGAAGAAGAGGGTCGCCAGCTACAAAATGTATTCTGTGGAAGGTAAGATCAAAGGCTCCTTCAGAAAGAGCTTCAGGTGGCTTAAGAACAAGTATTCACAAGTGGTTTATGGTTGGTAg 339 0.4454 MEDFQRSRSYANGQMMQIERYYGAPRPYDLRSYSASYAQTQIGPRDLKLKKGKSISAGSSFSKSWSFADPELQRKKRVASYKMYSVEGKIKGSFRKSFRWLKNKYSQVVYGW 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3620 112 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 1 112 - -
Ssu1g3620 112 Pfam Domain of unknown function (DUF3511) 67 111 IPR021899 -
Ssu1g3620 112 PANTHER DUF3511 DOMAIN PROTEIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3620 Ssu-Chr1 91679473 91679811 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3620 - - gmx:100527044 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0425 5 8758218 8758562 Ssu1g3620 1 91679473 91679811 PCT