Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0424 ATGGTGGGTGGTGCAGTAGTGGCGATGATAGGTGGTGCAGTGGATAGTGGTGGCAAAGCAGTGGAGGTTTCTGCCATCCAAACAATTTCTGGCTGTGGACTAGCAATTCTTTCaatgttttctcatttttatctcAAGGAAGTCGTGAATGCTATTGATTGGGTTGGCATTACATTGGTAGGTTTTGGCACAATAGGAGTTGGTGCTAGAAGTGAGGAGCAAGAGGTGGTTGCACTATCTATTTTTCACATACCAGGGTTGGCATTGTTGTTTTCATCTTGTTTGTAG 288 0.4201 MVGGAVVAMIGGAVDSGGKAVEVSAIQTISGCGLAILSMFSHFYLKEVVNAIDWVGITLVGFGTIGVGARSEEQEVVALSIFHIPGLALLFSSCL 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0424 95 PANTHER UNCHARACTERIZED 23 91 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu5g0424 95 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 23 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0424 Ssu-Chr5 8747050 8749034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0424 - - gmx:100819228 119.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0424 5 8747050 8749034 Ssu1g3621 1 91711601 91715649 PCT