Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3621 ATGTGGGAATCAATTGTTTTGACGGTGGTTGCCACCGCCGGCAACAACATCGGCAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCCCCTCTCTCTTTCAAGTTCAAGGTCATAAGGGCATATGCTTTGAACAAAACCTGGGTCATAGGTTTTCTAATGGACATATGTGGGGCACTGTTCATGTTAAGGGCATTAGCTCTGGCTCCTGTCTCTGTCATCCAACCAGTTTCTGGCTGTGGACTGGCAATTCTTTCagtcttttctcatttttatctcAAGGAAGTCATGAATGTTGTTGATTGGGTGGGCATTACCTTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGTGAGGAGCAAGAGGCTGTTGCTCTATCTATTTTTCACATACCGTGGCTGGCATTTGTTGTTTTCATCTTGTTTATAATGCTTAATGGATGGCTTTGTATATGCAAACATCATCGAAGAGAACAAGAGATGATGGAGTATGATGTTGTTGAGGAAATTATTTACGGCTTGGAATCTGGAATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGGTTTCTGTTCCTGGAGCAAGGCTTCCCCAAGCTGTTGGTTCCTATTTGCATCTTCATAAGTGTCTGTTCAAGTGGTACAGGCTTTTACTACCAGACACGTGGTCTAAAACATGGGAGGGCTATTGTAGTTTCTACATGTGCAGCCGTTGCATCAATTTTGACTGGTGTACTTGCTGGGATGCTTGCTTTGGGTGAGCGACTCCCTTCAGCCCCAAAAGCCCGCTTGTTACTTCTTCTTGGATGGCTACTTATTATTGTTGGCGTGATTTTACTTGTTGGTTCAGCAAAGCTAGTGAGATTCCTTCGATTTTCTTCACACCGCTTTAACAGAAGCAGTGTCGATAAGAATTATGGCCCTAGAAGATCTGGAACTTCCCGTATTAGGGAACCTGGCCCAGCTGCTGTCATTCAAGCAGCGACCTTAAATCATTTACTATCATCATCTTCCAAAGAAAAAGCTTGA 1035 0.4329 MWESIVLTVVATAGNNIGKILQKKGTVILPPLSFKFKVIRAYALNKTWVIGFLMDICGALFMLRALALAPVSVIQPVSGCGLAILSVFSHFYLKEVMNVVDWVGITLAGFGTIGVGAGGEEQEAVALSIFHIPWLAFVVFILFIMLNGWLCICKHHRREQEMMEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLLVPICIFISVCSSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMLALGERLPSAPKARLLLLLGWLLIIVGVILLVGSAKLVRFLRFSSHRFNRSSVDKNYGPRRSGTSRIREPGPAAVIQAATLNHLLSSSSKEKA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3621 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
Ssu1g3621 344 Pfam Magnesium transporter NIPA 39 283 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu1g3621 344 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 341 - -
Ssu1g3621 344 PANTHER UNCHARACTERIZED 1 341 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu1g3621 344 Gene3D - 4 118 - -
Ssu1g3621 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 185 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3621 Ssu-Chr1 91711601 91715649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3621 - - gmx:100803982 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0424 5 8747050 8749034 Ssu1g3621 1 91711601 91715649 PCT