Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0422 ATGGGAAGAAGAGTCCCTAATGAGAATTACATCACATCGATAGacccatttctttctttttcattctacGTGGTAGGATTTGCCGCATGCATTGCTATAATCGCCGCTCTTTGTAGTGTGCGATTTCGAAGAAAATCATCATCAGCACCTGCTCCAATGTCTGACCGTGATTCAAATGAAGTGACAAATGGTTTGAATGCATCTACTACCCCACCATCAAATAACATGGAAGCCACAACAACATCTTTACAACATGAACATCCTAGTACCTCAGAGGCAACAATGTTGGAGAAcacaacacaaacacaaaacAAGGAGACGTTGGTTAAGGAGTTACCTCTTCCCCCAGCATTGCAGCAGCACCCCAATGTGGACCCCAAAATTGTGAAAAGGGCAACTTCTGAACGCAGGTTGTCTTTTAATTTGAGCATGAAGATGCGAAGGAGTTTCTCAGTGGCAAGAAACTGGGATCAAAAGGAGGGCAATGGTGGAGGGCAGAAAGGGATGTTGAAAACAGATGAGTCTGTGTGGATGAAGACAAAAGGGAAGTTGAAAACAGATGAATCTGTGTGGATGAAGACAATTATACTAGGGGGAAAGTGTGTTCCTGATGAAGAAGAGGATGCTGTGATCTATGAGGGCAAGGGGAAGAAAATCTCAGCATACCATCCTAGAAAGTCTACCTCTGTGTCACTTTCCAGGCAATGCTCTTACATCAATCCTGATGCCCTCTTTGTACCCCAACCCCATGAAGAAAGAATCAATAACATATGTGGggagaaaatttga 789 0.4081 MGRRVPNENYITSIDPFLSFSFYVVGFAACIAIIAALCSVRFRRKSSSAPAPMSDRDSNEVTNGLNASTTPPSNNMEATTTSLQHEHPSTSEATMLENTTQTQNKETLVKELPLPPALQQHPNVDPKIVKRATSERRLSFNLSMKMRRSFSVARNWDQKEGNGGGQKGMLKTDESVWMKTKGKLKTDESVWMKTIILGGKCVPDEEEDAVIYEGKGKKISAYHPRKSTSVSLSRQCSYINPDALFVPQPHEERINNICGEKI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0422 262 MobiDBLite consensus disorder prediction 51 93 - -
Ssu5g0422 262 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Ssu5g0422 262 PANTHER OS06G0150200 PROTEIN 1 180 - -
Ssu5g0422 262 PANTHER OS06G0150200 PROTEIN 181 251 - -
Ssu5g0422 262 PANTHER OS06G0150200 PROTEIN 1 180 - -
Ssu5g0422 262 PANTHER OS06G0150200 PROTEIN 181 251 - -
Ssu5g0422 262 MobiDBLite consensus disorder prediction 47 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0422 Ssu-Chr5 8730252 8731040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0422 - - pvu:PHAVU_001G037300g 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0422 5 8730252 8731040 Ssu1g3623 1 91732988 91733662 PCT