Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3623 ATGTATGTAATGGGAAGAAGAGTCCCCATTGAAAATCTCTCATTGATACACCCCGTTCTATATTTGTCATTCCTCGCTGCCAGCATGGCCATAATCACAGCCCTATGCAGCTTTCGGTTCCGAAGAAAATCATcgtcgtcgccaccaccaccgctcTCTGATCCCGTAGAAATAGCCAAAGACTTAGATGCTACCCCACCATCAAACACGGCTCCTCAACCCGAAACAGTAAACGAGAGCAACAATGAGGAGCAGGTAAAGGAGCTTCCTCTTCCACCCTCAATGCAGCACCCTAAGGACCCCTTTATCtcggaaaaaatgaaaagagtgaCTTCCGAACGAAAGGCACCGTTGAGTTTAAGCATCAAAATGCCGAGGAGTTTGTCCGTGGCACGGAATTGGGACCAAATtaaggaggagaaaaataaagggCCCAAGTTGAAAGCAGAGGACTCTGTTTGGATGAAAACGATTATTCTAGGAGATAAATGCGTTCCCGATGAAGAGGGCGATCCTGTCATCTTTGAAGGGAGGGGAAAGAGAATCGCGGCGTACCACACTAAAAAGCATAGCACCATGTCCATTTCTAGGCAAGGCTCTTTCCTCGATCCTGATGCATTGTCATTGTCTGTTccccaaacccaaacccaaGATAAAAGAAACAATGACACTTGA 675 0.4044 MYVMGRRVPIENLSLIHPVLYLSFLAASMAIITALCSFRFRRKSSSSPPPPLSDPVEIAKDLDATPPSNTAPQPETVNESNNEEQVKELPLPPSMQHPKDPFISEKMKRVTSERKAPLSLSIKMPRSLSVARNWDQIKEEKNKGPKLKAEDSVWMKTIILGDKCVPDEEGDPVIFEGRGKRIAAYHTKKHSTMSISRQGSFLDPDALSLSVPQTQTQDKRNNDT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3623 224 MobiDBLite consensus disorder prediction 66 87 - -
Ssu1g3623 224 MobiDBLite consensus disorder prediction 43 101 - -
Ssu1g3623 224 PANTHER OS06G0150200 PROTEIN 4 209 - -
Ssu1g3623 224 PANTHER OS06G0150200 PROTEIN 4 209 - -
Ssu1g3623 224 MobiDBLite consensus disorder prediction 204 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3623 Ssu-Chr1 91732988 91733662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3623 - K08819 pvu:PHAVU_009G078700g 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0422 5 8730252 8731040 Ssu1g3623 1 91732988 91733662 PCT