Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0383 ATGGAGAATGGGGACAACATTCTGGATGCCATCTTCGAAGAGGATAACTTGGACGAGGTTGAGATGATTGACGTTGAAGAAGGGGAATTAGCGGAGGAGGAGCAGCACGATTCCCAAAATTTATCGAGACAAAACGGTGCCGTAGGAACAGATGACAGAAAACCGCAGAGTAAGAACCGCAGGCGCAGAGCTAACAAGAGAAACAGGAGGAAGGGTTCGGCAACCGGTGCCGTCGACATTAACAGGTTTGTGATAGATACATGTCGGCGTCTGAAAGAGAAAAAGTCATACATGGTATATCCAGCTGTTGCTTGCCTTGGAGTTTCTGCATTAAGTGATCTCATCAAAGAGGTGGATGCTATACAGGCTTGTGGAGACCAGAAGACTGCTGGTGGTAGGCGATTTCGGACAGGGGGTGGTTTATTGTGGAGCATCATTAAGGTTCGAGAACCAAATGCTTACAAAGAGATAATGAAAAAAGCAAAGGAGTTTGAGAAGCAATTCAGGCAGCCAAGTGTTAAGCAACAACCCAAGCAAAAGAAAGAGGATTCTTCTCAAGGGGAGCCCTCTACATTTGCTAGTGGGCATCAGGGAAATGTTTCTGACCATCACTTTTCTGCATTGCAAATGCAAGATCAACATAAACCACCAGGTTCTGAAGAGAAGCGTAACTTTGTTCATGACAGATTAAGGATACCTGTTTCTTACGATGATGACCTGCTTGGATTAAGTGCGGATAACAACACAATCTGA 753 0.4502 MENGDNILDAIFEEDNLDEVEMIDVEEGELAEEEQHDSQNLSRQNGAVGTDDRKPQSKNRRRRANKRNRRKGSATGAVDINRFVIDTCRRLKEKKSYMVYPAVACLGVSALSDLIKEVDAIQACGDQKTAGGRRFRTGGGLLWSIIKVREPNAYKEIMKKAKEFEKQFRQPSVKQQPKQKKEDSSQGEPSTFASGHQGNVSDHHFSALQMQDQHKPPGSEEKRNFVHDRLRIPVSYDDDLLGLSADNNTI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0383 250 MobiDBLite consensus disorder prediction 165 185 - -
Ssu5g0383 250 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 1 241 IPR039047 GO:0006408
Ssu5g0383 250 MobiDBLite consensus disorder prediction 27 73 - -
Ssu5g0383 250 MobiDBLite consensus disorder prediction 165 225 - -
Ssu5g0383 250 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 84 163 IPR019385 -
Ssu5g0383 250 MobiDBLite consensus disorder prediction 186 207 - -
Ssu5g0383 250 Gene3D - 75 172 IPR038092 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0383 Ssu-Chr5 8170161 8174933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0383 K14291 - gmx:100775515 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0383 5 8170161 8174933 Ssu1g3653 1 92140640 92148675 PCT