Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3653 ATGGAGGACGGGGATAACATTCTGTATGCCATATACGAGGAGGATAACTTAGATGATGTGGATGGTGATGTTGACATGGTTGATGTTGAAGAAGGAGAGTTGGTGGAGCCTGATTCCCAAAATGCTTTGGGACAAAGCAGTGCTGGAGATATCAATGAAGCAAATCAAGAACCTCACAGTAAGAACCGCAAACGAAGAGCtaacaagaagaagaataagaagaagaggaagggtTCAGGATCGAATGCCATGGACATAAACAGATTTGTGTTAGATACGTGTCGACGGCTCAAAGAGAAGAAGTCATACATGGTATACACTGCTGTGGGTTGCCTTGGGGTCTCTGCATTAAGCGATCTCCTCAATGAGGTGGATGCAATACAGGCTTGTGGAGGCCAGAAAACTGCTGATGGTAGACGATTCCGGACAGGGGGTGGCATATTGTGGAGCATCTTAAAAGTTAGGGAACCAAAGGTCTACAAAGAgataatgaaaaaaacaaaggagTTTGAGAAACAATTCAGGCAGCCTAATGTGACGCAACGACCTGTGCTGAAGAAAGAGGATTCTTCTCAAGGAGTGCCCTTTTCATTTTCTGGAAAGGATCAGGGCAATGTGTCGGACAGTGATATTCTTGCATCCCAAATGCAAAATCAACATGAACCAGCAACTTCTGAAGAAAAGCCTATCTCTGTTCATGATAGGTTAAGGGTAGCTGTATCATATGATGATGATCTGCTTGGAGAGAATCCAGTCAATGATGCAACCTGA 771 0.4137 MEDGDNILYAIYEEDNLDDVDGDVDMVDVEEGELVEPDSQNALGQSSAGDINEANQEPHSKNRKRRANKKKNKKKRKGSGSNAMDINRFVLDTCRRLKEKKSYMVYTAVGCLGVSALSDLLNEVDAIQACGGQKTADGRRFRTGGGILWSILKVREPKVYKEIMKKTKEFEKQFRQPNVTQRPVLKKEDSSQGVPFSFSGKDQGNVSDSDILASQMQNQHEPATSEEKPISVHDRLRVAVSYDDDLLGENPVNDAT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3653 256 MobiDBLite consensus disorder prediction 62 77 - -
Ssu1g3653 256 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 90 169 IPR019385 -
Ssu1g3653 256 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 1 247 IPR039047 GO:0006408
Ssu1g3653 256 MobiDBLite consensus disorder prediction 19 82 - -
Ssu1g3653 256 MobiDBLite consensus disorder prediction 39 55 - -
Ssu1g3653 256 MobiDBLite consensus disorder prediction 19 35 - -
Ssu1g3653 256 Gene3D - 81 178 IPR038092 -
Ssu1g3653 256 MobiDBLite consensus disorder prediction 180 225 - -
Ssu1g3653 256 MobiDBLite consensus disorder prediction 180 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3653 Ssu-Chr1 92140640 92148675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3653 K14291 - gmx:100793038 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0383 5 8170161 8174933 Ssu1g3653 1 92140640 92148675 PCT