Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0365 ATGTCGAGGAGACCGGGGAATCCTTCTAGAAGGTTCGGTGACAGTGGCGGTGGATTGTTTTCGGCTACGAAATCTAGGTCGTCGCCTCTGTCTATTGCGATCGtagttgtgGGAGGTTTTTTTCTCATTGGCTATTTGTATAGGGGCTCAGGTGGATTTGGCAGCCGTTTAGAGTCTGTTAGCAGGGTTgaagGTGATTATTTGTGCAGTGCAGAGGTCCAACGAGCGATTCCCATTTTACAGAAAGCATATGGAGATAGCATGCATAAAGTTTTGCATGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTGCTAAAGGAGGAGGAAACTGAAGCCTGGGGAATAGAACCATATGATATAGAGGATGCTGATAATAATTGCAAAGCACTTATCCGTAGAGGCAGTGTGCGTGTGgctgatatcaagtttcctcttCCTTACAGGCCAAAATCTTTCTCTCTTGTAATTGTTTCAGATACTCTGGATTACCTATCTCCCAGATACCTCAACAAAACTCTTCCGGATTTGGTGAGGGTATCAGCTGATGGTGTAGTGATACTGACTGGTTTTCCCAGCACTCAAAAGGCCAAGGTAGCAGATGTTTCTAAATTTGGAAGAGCGGCCAAGATGAGGAGTTCATCCTGGTGGGTCCGGTATTTCCTCCAGATTAACTTGGAGGAGAATGAAGCTGCTTCTAAGAAGTTTGAACAGGCTTCAACCAAGAGTTCATATGTTCCAAGATGCCAGATATTCCACTTGAAGTCACTCCATTGA 777 0.4299 MSRRPGNPSRRFGDSGGGLFSATKSRSSPLSIAIVVVGGFFLIGYLYRGSGGFGSRLESVSRVEGDYLCSAEVQRAIPILQKAYGDSMHKVLHVGPDTCYVVSKLLKEEETEAWGIEPYDIEDADNNCKALIRRGSVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPDLVRVSADGVVILTGFPSTQKAKVADVSKFGRAAKMRSSSWWVRYFLQINLEENEAASKKFEQASTKSSYVPRCQIFHLKSLH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0365 258 Gene3D Vaccinia Virus protein VP39 71 249 IPR029063 -
Ssu5g0365 258 PANTHER PROTEIN, PUTATIVE-RELATED 1 258 - -
Ssu5g0365 258 CDD AdoMet_MTases 90 191 - -
Ssu5g0365 258 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 194 IPR029063 -
Ssu5g0365 258 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 258 IPR044689 GO:0008168|GO:0045488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0365 Ssu-Chr5 7692109 7696699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0365 K23871 - gmx:100796049 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0365 5 7692109 7696699 Ssu5g0365 5 7692109 7696699 ECH
Ssu5g0365 5 7692109 7696699 Ssu1g3672 1 92591218 92594047 PCT