Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3672 ATGTCGCGGAGACCGGTGAATCCGTCTCGGCGATGTGGAGGAAATTCTGATCACTTTTGGTTCGGCGGATTTGGCAGCCGTTTGGAGTCTGTCAACAGGGTTgaagGTGATTATTTGTGTACTGGAGAGGTCCAACGAGCTACTCCCATTTTGCAGAAAGCATATGGTGATAGCTTGCATAAAGTTTTGCATGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTGCTAAAGGAGGAGGAAACTGAAGCCTGGGGTACAGAACCTTATGATATAGAGGATGCTGATGGTAATAGCAAAGCACTTATCCGCAAAGGCATTGTACATATGgctgatatcaagtttcctcttCCATACAGGCCAAAATCTTTCTCTCTCGTAATTGTTTCGGATGCCCTTGATTTCTTATCCCGCAGATACCTTAACAAAACTCTTCCGGATTTGGCAAGGGTATCAGCTGATGGGATAGTGATATTTACTGGTTTTCCAGATAATCAAAAGGCTAAGGTTGCAGATGTTTCTAAATTTGGAAGAGCGCCTAAGATGAGGAGTTCATCCTGGTGGGTCTGGTATTTCCGTCAGATTAACTTGGAGAAGAATGAAACTGCTTCCAAGAAGTTTGCACAGGCTTCAACTAAGAGTTCGTACATTCCAAGATGCCAGATATTCCACCTGAAGTCTCTCCATTAA 690 0.4217 MSRRPVNPSRRCGGNSDHFWFGGFGSRLESVNRVEGDYLCTGEVQRATPILQKAYGDSLHKVLHVGPDTCYVVSKLLKEEETEAWGTEPYDIEDADGNSKALIRKGIVHMADIKFPLPYRPKSFSLVIVSDALDFLSRRYLNKTLPDLARVSADGIVIFTGFPDNQKAKVADVSKFGRAPKMRSSSWWVWYFRQINLEKNETASKKFAQASTKSSYIPRCQIFHLKSLH 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3672 229 Gene3D Vaccinia Virus protein VP39 52 223 IPR029063 -
Ssu1g3672 229 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 22 229 IPR044689 GO:0008168|GO:0045488
Ssu1g3672 229 PANTHER PROTEIN, PUTATIVE-RELATED 22 229 - -
Ssu1g3672 229 CDD AdoMet_MTases 61 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3672 Ssu-Chr1 92591218 92594047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3672 K23871 - gmx:100815049 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3672 1 92591218 92594047 Ssu1g3672 1 92591218 92594047 ECH
Ssu5g0365 5 7692109 7696699 Ssu1g3672 1 92591218 92594047 PCT