Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0295 ATGTCCGACCCGGAAACCACCCCCGAACAAGCCTCCGCTCCGCCGCAGTCCGACGCCGCCGCCGCCATCTCCTTCAGCATATGGCCCCCGACTCAGCGCACCCGCGACGCCGTCATCAACCGCCTCATCGAGACCCTTTCCGCCCCCTCCGTCCTCTCCACGCGATACGGCACTCTCTCCTCCGACGAAGCCTCCGCCGCCGCCAGCCGGATAGAGGACGAGGCCTTCTCCGCCGCCGGCGCCTCCGCCGCGGCCTCCGGCGACGGCATTGTAACCCTCCAGGTGTACTCCAAGGAGATCAGCAAGCGCATGCTTGACACCGTTAAGGCCAGAGCCCCGCCGGGCCGAGCCGCCGTAGAGGGCGTCGCCGCCACCGTCTCCGACCCTCTTTAA 393 0.6896 MSDPETTPEQASAPPQSDAAAAISFSIWPPTQRTRDAVINRLIETLSAPSVLSTRYGTLSSDEASAAASRIEDEAFSAAGASAAASGDGIVTLQVYSKEISKRMLDTVKARAPPGRAAVEGVAATVSDPL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0295 130 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 5 122 IPR044692 GO:0000278|GO:0048527
Ssu5g0295 130 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 5 122 - -
Ssu5g0295 130 Pfam WPP domain 24 113 IPR025265 -
Ssu5g0295 130 Gene3D WPP domain 24 117 IPR038214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0295 Ssu-Chr5 6304084 6304476 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g0295 - - gmx:547538 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0295 5 6304084 6304476 Ssu5g0295 5 6304084 6304476 ECH
Ssu5g0295 5 6304084 6304476 Ssu1g3743 1 93876675 93877166 PCT