Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3431 ATGCATATGGGTGGTTGTGTTGGATGTTATACAAGGCCTACACTGAGTACTACAGTGGATGTGCCATCCAAAGAATTGGCAACACAAGGTAAGACAGTTAGGAAACCTAGTTCATCAGAGGATTTCTGGACCACCAGCACGCATGATATGGACAACAGTGCCGTCCAGTCACAGGGGAGCATCTCCTCCACCAGTCTAACAAACCAAGCTGTCGTTCCTCATGTTGGTTCTTCCAAAAGCAGCAGCAACCCCACTGAATTTGTAAATCATGGTCTAATTCTTTGGAATCAGACTCGGCAACGTTGGGCGGAAATAAAAGGTCTGAGAACCGAACACAACAATTACGAGAACCTAAATTGA 360 0.4556 MHMGGCVGCYTRPTLSTTVDVPSKELATQGKTVRKPSSSEDFWTTSTHDMDNSAVQSQGSISSTSLTNQAVVPHVGSSKSSSNPTEFVNHGLILWNQTRQRWAEIKGLRTEHNNYENLN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3431 119 PANTHER DUF4050 FAMILY PROTEIN 3 112 - -
Ssu4g3431 119 PANTHER OS07G0479600 PROTEIN 3 112 - -
Ssu4g3431 119 Coils Coil 105 119 - -
Ssu4g3431 119 MobiDBLite consensus disorder prediction 26 85 - -
Ssu4g3431 119 Pfam Protein of unknown function (DUF4050) 46 106 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3431 Ssu-Chr4 84946288 84948306 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3431 - - gmx:547651 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1021 6 16688742 16691562 Ssu4g3431 4 84946288 84948306 ECH
Ssu4g3431 4 84946288 84948306 Ssu4g3431 4 84946288 84948306 ECH