Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3317 ATGTCATCACCATTATCACCCATGCCGGAAATCCCCGTCGATTTCCGCGCTCCGCCGCCCTCCCCGGTGGCCTCCGGGCGGAGGTCCACCTTCACGAACGACGACGTTTTGACTGAGTTCCTGGAGGCCTCGCTCCGCGTCCCCGATCTCGTCCTGCCCGACAAGATCTTCCCCAAACAGAAGCACCTCGAAGCGCCTCCCGAGGTCGATTTCGTGGCCCTCTGCTTCCACAGCGACGATGCTCTCCGCGACGTCGCTTCCGACGCGCTCGCCAGAATCGGATGCTTCCAGCTGCTCAACCACGGCATTCCGCCGCAACTCATCGCCGCCGCCGCCGAGGCCGCCGCCGGAGTCTTTCGGGTGCCGCCGGCGAAGCGAATGGCGGCCACGAGGTCGCCGGAGAAGCCCTGGGGGTTCGAGGAGTATCACGCGGGGGAGGAGGAAGGAGAAGGGAGTGAAGAATTCGTGTGGTGCAATGACAACGAGTTGAAGTCCAAAATGGAGGGAATTTGGCCAATTGGATATCCAAATTTCAGTGAGAAGATGGAAAAGCTTATGTCCCGCATAGAGATGGTGGGTACGAAAGTTTTGCCTGTGATATTGAAAAACGGCACTATAGAATTTGTGGGTGGGCACGAGGTTGGGACTCTTTGCTGCGTTTACAAGCATCGCCGAGATAATACCAGCGATCGATGGGCTAACTCCTTGAAATACGACGTGATTAGAATGCTGATTAGGGGAACCGATTACTCACATTCCTTGTGCTTCCATGTATGTAATGACTCTTCACAGTTTCACGTTTACTCCAAGAAAAGTTGGCTCTCTTTCTGCCCTCAGCAAGGTGCCCTTATAGTCACCGCTGGAGATCAAACCCAGGTATTGAGTGGTGGACAGTACAAGCACGTGATTGGAAGGCCAATCTTTaaaggagagaaagaagagagcaTTTCAATGGCTTTCCTCTATTCTACTCAAAACACGAAGAACAATTTTCAAACCAGTAGGGGAAGAACTATTTCTCTTGGCCAGCAAGCCATCTTGGCTTTAATTCTGACCCTTGTGTACCGTGTCATGATTTTTGTCTacaaaaaactcaattaa 1101 0.5141 MSSPLSPMPEIPVDFRAPPPSPVASGRRSTFTNDDVLTEFLEASLRVPDLVLPDKIFPKQKHLEAPPEVDFVALCFHSDDALRDVASDALARIGCFQLLNHGIPPQLIAAAAEAAAGVFRVPPAKRMAATRSPEKPWGFEEYHAGEEEGEGSEEFVWCNDNELKSKMEGIWPIGYPNFSEKMEKLMSRIEMVGTKVLPVILKNGTIEFVGGHEVGTLCCVYKHRRDNTSDRWANSLKYDVIRMLIRGTDYSHSLCFHVCNDSSQFHVYSKKSWLSFCPQQGALIVTAGDQTQVLSGGQYKHVIGRPIFKGEKEESISMAFLYSTQNTKNNFQTSRGRTISLGQQAILALILTLVYRVMIFVYKKLN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3317 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 84 153 IPR026992 -
Ssu4g3317 366 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 14 357 - -
Ssu4g3317 366 Gene3D - 66 331 IPR027443 -
Ssu4g3317 366 PANTHER DOWNSTREAM TARGET OF AGL15-4 PROTEIN 14 357 - -
Ssu4g3317 366 MobiDBLite consensus disorder prediction 1 29 - -
Ssu4g3317 366 SUPERFAMILY Clavaminate synthase-like 57 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3317 Ssu-Chr4 83515184 83517880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3317 - - gmx:100786234 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3317 4 83515184 83517880 Ssu4g3317 4 83515184 83517880 ECH
Ssu8g0252 8 3703059 3705945 Ssu4g3317 4 83515184 83517880 PCT