Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2955 ATGGAATTGACTTCAAAATCTGCTACAAGGGCATACCTTGATACCCTTCAACTGTGCAACAATCATAAAAGACAATATGGCAGTTGGAGAGTTCAAAATCCAGGAAGCAATGAATTTGTAATCAGCATTAGCAGCAGGAATGAAAAACTTATAGTGGAAGTGACATCTCGTGTATCCCTATGCACAATAGCTCTTGCAGTTGCTGCAAGACAAACTGGAGGCAGGATGGTGTGTATTCTCCCTCAGTCAGTCCTTTATGAGTCCAAAGAAGTTATTAACAACTCAGGCCTTAAAGACCAAGTAGAGTTTAGAACTGAAGACTCCTCCAAGCTACTACCATACTATGAGAACATTGATTTCTTTCTTGTTGATTGCAAGGATGAGAACTATGCAAGGTTGCTCAATTTGGTAGATGTTAATCTCACAAGATCAATAGTGGTGGCAAAGAATGTGGTTGGTGAGGATGAGAAATTACAAGTAAGATCTCTAAAGCTTCTTTTAGGGAATGAAAGCATCTTTTAG 522 0.3908 MELTSKSATRAYLDTLQLCNNHKRQYGSWRVQNPGSNEFVISISSRNEKLIVEVTSRVSLCTIALAVAARQTGGRMVCILPQSVLYESKEVINNSGLKDQVEFRTEDSSKLLPYYENIDFFLVDCKDENYARLLNLVDVNLTRSIVVAKNVVGEDEKLQVRSLKLLLGNESIF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2955 173 PANTHER DUF1442 FAMILY PROTEIN 1 157 IPR009902 -
Ssu4g2955 173 Pfam Protein of unknown function (DUF1442) 6 152 IPR009902 -
Ssu4g2955 173 PANTHER DUF1442 FAMILY PROTEIN 1 157 - -
Ssu4g2955 173 Gene3D Vaccinia Virus protein VP39 9 166 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2955 Ssu-Chr4 75609526 75610748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2955 - - gmx:102660803 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2955 4 75609526 75610748 Ssu4g2955 4 75609526 75610748 ECH
Ssu4g0127 4 2157027 2158221 Ssu4g2955 4 75609526 75610748 PCT