Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0127 ATGGAATGGTCTGCAACATTTGCTACAATGGCTTACCTGGATGCCCTTCAACTGTGTAGCAATCATAAAAGACAACACGGCTCTTGGAGAGTGCAACAACAAGGAAGCAATGAATTTGTATCAGCATTAGCAGCTGGGATGAAAGCAAAGTTTATAGTACAAGTGACATCTCGAGCATCCCCATCAACAATAGCCCTTGCAGCTGCTGCAAGACAAACTGGTGGCAGGTTGGTGTGTATTCTCCCGGAACCGGTCCTTGATGAGTCAAAAGAAGTTATTAGAAACTCGGGGCTTAAAGATCAAGTAGAATTTAGAACTGAAGATCCGACCAAGATATTGccctattatgaaaatattgattTCTCCTTAGTTGATTGCAAAGATGAAAACTATGCAAGGTTGCTCAACTTGCTAGATGTCAATCCTACGAGATCTGTAGTGGTGGCAAACAATTTGGTTGGTAATACAAAAGGGTTGGGAGGCTATGTAAGAAGAAAGGATGAGAAAGTTGCAGTGAGATCTCTACAGCACCCTATAGGGAAAGGTATGGAAGTGACTATGCTTTGCAAGAATGATGAAACTGATAAGAGACTTGGGGTCAGAGAACATCGTGGCAGAAAAAGGAGCAAGAGTAAGTGGGTTGCCAAGTTTGATGAGAAGAGTGGTGAGGAGCATATATTCAGGGTACCCCACATTGACTTGTTGTGGAATTAA 714 0.416 MEWSATFATMAYLDALQLCSNHKRQHGSWRVQQQGSNEFVSALAAGMKAKFIVQVTSRASPSTIALAAAARQTGGRLVCILPEPVLDESKEVIRNSGLKDQVEFRTEDPTKILPYYENIDFSLVDCKDENYARLLNLLDVNPTRSVVVANNLVGNTKGLGGYVRRKDEKVAVRSLQHPIGKGMEVTMLCKNDETDKRLGVREHRGRKRSKSKWVAKFDEKSGEEHIFRVPHIDLLWN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0127 237 Pfam Protein of unknown function (DUF1442) 3 228 IPR009902 -
Ssu4g0127 237 PANTHER DUF1442 FAMILY PROTEIN 1 231 IPR009902 -
Ssu4g0127 237 PANTHER DUF1442 FAMILY PROTEIN 1 231 - -
Ssu4g0127 237 Gene3D Vaccinia Virus protein VP39 11 192 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0127 Ssu-Chr4 2157027 2158221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0127 - - gmx:102665340 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0127 4 2157027 2158221 Ssu4g2955 4 75609526 75610748 PCT