Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2954 ATGGCAAATATTAGATCTTGGACTCAGATATGGCCATCTTTTGTCAGGCTATGTATTCTGAATCTTGTCTTGGATTTCAAAATCATAGCACTGGCGGATGACAGTGGAAGTAGTGCTTTTACAGCAGAAAACACTTGCAAGAACACAAATTATCAAAGTTTCCTCCCTCCACCGTACCAGAATATATCCCATATGATATGCACACCTGTATGGGATACCTACGAATTGAGGTACATCCAGAATGGTGATACCACAACTATCATATTATCTGCTCCATACACTATAGGGTGGATAGGAATTGGATTTTCTAGAGATGGTATGATGGTTGGTTCCAGTGCACTGGTGGGATGGATTAGTAAACATGGTCATGCAAAAATCAAGCAATTTTACCTAAGGGGTAGGAAGCCATCAGAAGTCATAGTAGACAAAGGTGAACTCCCACTCAGTAATGTCCCTGCGGCTGTGGCAACTAGTGGGGCGGAAATTCATTTGGCATTTCAGTTGCAGATGACAACCCCATTTGAGAAACAACCAATTTTGTTGGCTTTTGGTACTAAATATCCACAGAACCACCACCTCTCCAAGCATGAAGACAAAACGGctattgtatttgatttttctgCAGGTTCTACGGGTCCTGCATCCCATGAATTGATTCAGATGAGGACGAACCATGGAATTTTGGGTATAATAGGGTGGGGTCTAATCTTGCCTGTAGGGGCAATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGTTCTATCTCCATGCAGTCATTCAGTTGGTGGGATTCACATTTGGGCTTGGTACAGTCGTTCTTGGATTACGACTCTATTCCAAAATGCATGCCCATATACCAGCTCACAGAGGCATAGGCATCTTTGCCCTGGTGCTAAGTATTCTTCAGATATTGGCATTCTTCTTGAGACCAAAAAAGGATTCCAAGATTCGAAAAATTTGGACTTGGTACCACAGTTGGTTTGGAAAGTTGGCACTCATATTTGCAGCCATTAACATAGTGTTGGGGATGCAAGCTGCGGGGGCAGGAAGTGATTGGAAGATAGGCTACGGATTCCTTGTTGGTATTATGGTTGTTGCAGCTATTGTTCTTGAAGTGTTGGCTTATTTGAAAAGATCAGAGGAGCGTTCTCTACCTCCTAACTTCCAATTTGACCCTGCTGGAGGAGCTACATTTCCAAGTAATCAagcactttctttctttttccttccctCGTTTATATCATCTGTTTACTGA 1260 0.4111 MANIRSWTQIWPSFVRLCILNLVLDFKIIALADDSGSSAFTAENTCKNTNYQSFLPPPYQNISHMICTPVWDTYELRYIQNGDTTTIILSAPYTIGWIGIGFSRDGMMVGSSALVGWISKHGHAKIKQFYLRGRKPSEVIVDKGELPLSNVPAAVATSGAEIHLAFQLQMTTPFEKQPILLAFGTKYPQNHHLSKHEDKTAIVFDFSAGSTGPASHELIQMRTNHGILGIIGWGLILPVGAIIARYFRHKDPLWFYLHAVIQLVGFTFGLGTVVLGLRLYSKMHAHIPAHRGIGIFALVLSILQILAFFLRPKKDSKIRKIWTWYHSWFGKLALIFAAINIVLGMQAAGAGSDWKIGYGFLVGIMVVAAIVLEVLAYLKRSEERSLPPNFQFDPAGGATFPSNQALSFFFLPSFISSVY 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2954 419 Gene3D - 200 385 - -
Ssu4g2954 419 CDD Cyt_b561_FRRS1_like 209 374 - -
Ssu4g2954 419 SMART 561_7 224 345 IPR006593 -
Ssu4g2954 419 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Ssu4g2954 419 PANTHER MEMBRANE PROTEIN-LIKE 15 392 - -
Ssu4g2954 419 Pfam Eukaryotic cytochrome b561 225 346 IPR006593 -
Ssu4g2954 419 SMART DOMON_3 97 184 IPR005018 -
Ssu4g2954 419 CDD DOMON_DOH 71 201 IPR045266 -
Ssu4g2954 419 ProSiteProfiles DOMON domain profile. 72 184 IPR005018 -
Ssu4g2954 419 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 15 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2954 Ssu-Chr4 75603891 75605904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2954 - - gmx:100807608 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2954 4 75603891 75605904 Ssu4g2954 4 75603891 75605904 ECH
Ssu4g0128 4 2160066 2162549 Ssu4g2954 4 75603891 75605904 PCT