Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0128 ATGGCAAAGCCAAGATCTTGGACTCAGATATGGCCTTCTATTGTCAGAGTGTGTATTCTGAATTTTGTTCTGAACTTCAAGATCGTAGCGTTAGCGGACGACACTGGAAGTAGCAGTATTGTATCAGAAGGTAACTGCAAGAACACAAATTATCAGATTTTCCTCCCTCCACCGTATCAGAATATATCCTCTACCATATGCAAACCTGTTTGGCATGCATACGAATTGAGGTACACCAAGATGGGTGATAccacaactattatattatctGCTCCCTACACTGTTGGGTGGGTGGGAATTGGATTTTCTAGGGATGGCATGATGGCTGGGTCCAGTGCAATGGTGGGATGGATTAACAAACATGGTCATGCAAAAGTCAAGCAGTTTTATCTAAGGGGTAGGAGGCAATCAGAAGTAATTGTAGACAAAGGTGAACTGCCTCAAAATAATGTGCCTGCCGCCGTGGCAACAAATGGGGCTGAAATTTACATAGCGTTTCAGCTGCAAACGACAGTTCCATTTGGGAAGCAACCGATTTTATTGGCTTTCAGTACGAAACATCCACAGAACCACCATCTATCAAAACATGTTGACAAAACAGcaattgtatttgatttttcttcagGTTCTACAGGTCCGGTATCCAATGGTTTAATTCAAATGAGAAAAAGCCATGGAATAGTGGGTATAATAGGGTGGGGCCTAATCCTGCCTGTGGGGGCAATTATTGCTAGGTACTTCAGACATAAGGATCCCCTATGGTTCTATCTCCATTCAGTCATTCAATTTGTGGGATTCGCATTTGGGCTTGGCACAGTCCTTCTTGGATTACAACTCTATAGAAACACGCATGTCCACATACCAGCTCACAGAGGCATAGGCATCTTTGTCCTTGTCCTAAGTATTCTTCAGATATTGGCATTCTTCTTGAGGCCAGACAAGGATTCGAAGAATCGAAACATTTGGAATTTGTATCACAGTTGGTTTGGAAGAATGGCACTTTTCTTTGCGGCCTTGAATATAGTTTTGGGGATGCGAGCTGCGGGGGCAGGGAATGATTGGAAGGCAGGCTATGGATTCCTTGTTGGCATTATACTTGTGACAGTTATCGTTCTGGAAGTATTGGCGTATTTGAAAAGGTCAGAAAAGCGTTCTCTTCCTCAGACTTTCCAAATGGACTCAGTTGGAGAAGCTACCTTTCCAACCAATCTAGCTAAAGGGTGA 1224 0.4216 MAKPRSWTQIWPSIVRVCILNFVLNFKIVALADDTGSSSIVSEGNCKNTNYQIFLPPPYQNISSTICKPVWHAYELRYTKMGDTTTIILSAPYTVGWVGIGFSRDGMMAGSSAMVGWINKHGHAKVKQFYLRGRRQSEVIVDKGELPQNNVPAAVATNGAEIYIAFQLQTTVPFGKQPILLAFSTKHPQNHHLSKHVDKTAIVFDFSSGSTGPVSNGLIQMRKSHGIVGIIGWGLILPVGAIIARYFRHKDPLWFYLHSVIQFVGFAFGLGTVLLGLQLYRNTHVHIPAHRGIGIFVLVLSILQILAFFLRPDKDSKNRNIWNLYHSWFGRMALFFAALNIVLGMRAAGAGNDWKAGYGFLVGIILVTVIVLEVLAYLKRSEKRSLPQTFQMDSVGEATFPTNLAKG 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0128 407 CDD DOMON_DOH 74 139 IPR045266 -
Ssu4g0128 407 PANTHER MEMBRANE PROTEIN-LIKE 13 393 - -
Ssu4g0128 407 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Ssu4g0128 407 CDD Cyt_b561_FRRS1_like 204 374 - -
Ssu4g0128 407 Pfam DOMON domain 74 166 - -
Ssu4g0128 407 ProSiteProfiles DOMON domain profile. 72 186 IPR005018 -
Ssu4g0128 407 SMART 561_7 224 345 IPR006593 -
Ssu4g0128 407 Gene3D - 200 386 - -
Ssu4g0128 407 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 13 393 - -
Ssu4g0128 407 SMART DOMON_3 97 184 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0128 Ssu-Chr4 2160066 2162549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0128 - - gmx:100782231 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0128 4 2160066 2162549 Ssu4g0128 4 2160066 2162549 ECH
Ssu4g0128 4 2160066 2162549 Ssu4g2954 4 75603891 75605904 PCT