Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2918 ATGGAGGACTCGGCCAAGCTGCGTTTGGTGCGGTGCCCCAAGTGCCAAAACGTTCTTCCCGAGCTTGCCAATTATTCTGTTTATCAATGTGGTGGTTGTGATGCTGTTCTTCGAGGAAAGCCTAAAGGTTCTGAAGGTGGTAGGTTGTGGGAGGTGTCAGATGAGGGACAAGGTGGAGGAGATCATGGCAAATCAGGAAGTTTCTTGGGGAAAGGGGCAGTTGACTTGAGTGATAATTCAGATGTTGATGTTAGGTCCAGCGGTGGTTTCTCCATCGAGGGTCAAAGAAGGGATTTGGGGGAACCGAATAAAGGGCATGAGAGGTTTTTGGACGATTCCAAGGATGGGGATGAGAAAGGGGTTTTGGAGAAGGGTTTTGATGTCAATGAAGACAAAAGGGGAAGAGAGCAACTGGAGCAGAAGAAGTCTCGAATGGGAGGGGACCAATTCTATAGGAGAGTGTCTAATTGGCCAAATGGGGAGAGAGGTGAGATGGAGGGGATTTGGAGAAAGCCACAAGCTGATATGGAGGGTGTGAGGTTTCCCACTTTGAATTATCCTGATGAGGGATCTTCAAATAGCTATTCCAGTTTTCCTTACAATTATGGGGGACAATGGAGGAATTATAAGGACGTGGATGGTGTGAATAGGGTTCAGCACCTTGAGCAAGATCGAGCTGAGATTCTGAGGAAGCTGGATGAGTTATCCAACCAGTTGAGCAAGTCTTCTGAGATTGTTAGTAACCCAAAAGAAAAGGTTCTTCCTGATGGAAAGATGGTTCCTCCAGATCCTTATAGTGGCCCTGATACTCGGTTTCCAGATGGATCATCGGCGATGAACAGGACCTCGAGACAATTCTTTGGCCCTAATAAACACATCGCAGCTCCCCCTTATTTCAATTATCACCATGATCCATATGCTTACACAAGTGGTCATGAAATGGGTATGCTCAACTTCCACCCTTCCATGCATAATCCAAATTATATTCCTGGATATGGGGATCCTTTTGTATCCCAGATGATGAGAGGTTCACATCCTTTACCTCATCAGTTCCCGCAAAAACCAATGCCTCCCTACTTTCCTGCGCGCTATGCTGATACTGGTCCAGATTCATATGATCCATATGCACATAATGCTATGCTTCACCCGCCTTCCTGCTCTTGTTTTCGTTgctatgaaaataaaagaagaggtgCAGTGTTGGCGCCACCTGCTGCATTCATTAACAGCAGATTCCCTCATACCCCTGCCCCAACTGATCCTATGTTGTACCATCGTGAGATCCCAGGGGCAGTTGGTCCACATGTTCATAATTCTAGAACTGCCATTCCTGCTGTGAGTTTACATGAAAAACCGCTACATACAAGATGGCCTAGAGACTACAATTCTGAGATGGGTGGGATTGTCGGAAGCCATCCTCGAAAAGTAATGCCTGCTAGTGGTAGTCGGCATTGCCATCCTATTGCTGGTGGTTCTCCTTTCATCACATGTCATAATTGCTTTGAGTTACTGCAACTGCCTAAAAAAACACTGGTCATGGTGAAAAATCATAAGCAGAAAATGCGATGCGGGGCTTGTTCttcagaaataaaaattgcTGTCATCAATAAGAAGCTAGTTATTTCTCTTCATTCAGAAATGGGGGAAACTACCACATCCACAGGGATTGATGATACCACTAATGAGGTTGTGAATAGACATGTATTCCATGCCCGTGGTGATCTGAACACAAGTGCTGTGAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCACTCAGTTGATAGAGAATCTCCTGTGCCGGCTGCAGACCCAAGCTTGAACTCTAGCAAGTCCCGGGAGATGCAGACTTCCCATTCTTCATCTCCCAGTACCACTGATGATGAAAATAGTCCAGAAGTTATGACTGCACCAAGTGAAGCTACAAAGTCCTTTCATCAGTCATCTAAAGCCTCTCTATCTCCTCCACCTGGTGGCTCATGTAATGACCATGCTGTAAATCGATTAGGGAAAGGAAACCAAAGCAGTCGCTCTGATCAAGAGAAGAATACCTCGAGGCAAAATTCTTTGAAAGAGGTAGCACTTGCAACTGAGATGGATGTCCATGATTATTCTAACACGGTGGTCTCCCAGGATTCTGGTGATGCAAGCGGAGAACATGATCATCCTAGATATAACAAAAGGGGTGAATCAATTTTAGCAAACATTATCAAGAAAGATAATGGCAAAAGTAATGTTACTATAAACGGACAGCCCATACCAGATCGTGCGATTAAAAAGGCAGAAAAGCTAGCTGGACCAATCCAGCCAGGAAATTACTGGTATGATTTCCGGGCAGGATTTTGGGGTATCATGGGTGGACCATGTCTTGGAATAATTCTGCCATTCATAGAAGAGTTCCAGCATCCCATGCCGGATAAATGTGCTGGTGGAAATACTGGTGTTTTTGTAAATGGTAGAGAACTTAACCAGAAAGATTTAGATTTGCTTTCTCGTAGAGGACTTCCTCGTGATAGCAATAGATCTTATATCATTGAAATTTCTGGGAGAGTCCTGGATGCAGACACAGGAGAAGAGCTGGACAGCCTTGGGAAACTTGCACCGACAGTGGAGAAAGAAAGGCGTGGATTTGGCATGAAAGTACCCAGAACAGCTGCACAATAg 2667 0.4432 MEDSAKLRLVRCPKCQNVLPELANYSVYQCGGCDAVLRGKPKGSEGGRLWEVSDEGQGGGDHGKSGSFLGKGAVDLSDNSDVDVRSSGGFSIEGQRRDLGEPNKGHERFLDDSKDGDEKGVLEKGFDVNEDKRGREQLEQKKSRMGGDQFYRRVSNWPNGERGEMEGIWRKPQADMEGVRFPTLNYPDEGSSNSYSSFPYNYGGQWRNYKDVDGVNRVQHLEQDRAEILRKLDELSNQLSKSSEIVSNPKEKVLPDGKMVPPDPYSGPDTRFPDGSSAMNRTSRQFFGPNKHIAAPPYFNYHHDPYAYTSGHEMGMLNFHPSMHNPNYIPGYGDPFVSQMMRGSHPLPHQFPQKPMPPYFPARYADTGPDSYDPYAHNAMLHPPSCSCFRCYENKRRGAVLAPPAAFINSRFPHTPAPTDPMLYHREIPGAVGPHVHNSRTAIPAVSLHEKPLHTRWPRDYNSEMGGIVGSHPRKVMPASGSRHCHPIAGGSPFITCHNCFELLQLPKKTLVMVKNHKQKMRCGACSSEIKIAVINKKLVISLHSEMGETTTSTGIDDTTNEVVNRHVFHARGDLNTSAVNFSSDDYSGYDFHSVDRESPVPAADPSLNSSKSREMQTSHSSSPSTTDDENSPEVMTAPSEATKSFHQSSKASLSPPPGGSCNDHAVNRLGKGNQSSRSDQEKNTSRQNSLKEVALATEMDVHDYSNTVVSQDSGDASGEHDHPRYNKRGESILANIIKKDNGKSNVTINGQPIPDRAIKKAEKLAGPIQPGNYWYDFRAGFWGIMGGPCLGIILPFIEEFQHPMPDKCAGGNTGVFVNGRELNQKDLDLLSRRGLPRDSNRSYIIEISGRVLDADTGEELDSLGKLAPTVEKERRGFGMKVPRTAAQ 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2918 888 MobiDBLite consensus disorder prediction 97 148 - -
Ssu4g2918 888 MobiDBLite consensus disorder prediction 593 689 - -
Ssu4g2918 888 MobiDBLite consensus disorder prediction 44 171 - -
Ssu4g2918 888 Coils Coil 218 238 - -
Ssu4g2918 888 Pfam Probable zinc-ribbon domain 489 533 IPR021480 -
Ssu4g2918 888 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 885 IPR040244 GO:1900150
Ssu4g2918 888 MobiDBLite consensus disorder prediction 604 657 - -
Ssu4g2918 888 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 885 - -
Ssu4g2918 888 MobiDBLite consensus disorder prediction 668 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2918 Ssu-Chr4 74525204 74529419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2918 - - gmx:100798240 1467.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2918 4 74525204 74529419 Ssu4g2918 4 74525204 74529419 ECH
Ssu4g0150 4 2513287 2517479 Ssu4g2918 4 74525204 74529419 PCT